ZFIN ID: ZDB-GENE-000605-2

Mapping Details

Gene Name:	RUNX family transcription factor 3
Symbol:	runx3

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	13	48,688,697 - 48,957,705	GRCz12tu
NCBI Map Viewer	13	48,688,697 - 48,957,705	GRCz12tu
Ensembl	13	45,092,766 - 45,123,051	GRCz11
NCBI Map Viewer	13	45,092,766 - 45,201,055	GRCz11
UCSC	13	-	GRCz11
UCSC	13	-	GRCz11
Vega	13	44,955,862 - 44,986,147	GRCv10

Mapped Clones containing runx3
DKEY-84B12	Chr: 13 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
w144	13	45,154,979	GRCz11	DIRECT		Gau et al., 2017
la018665Tg	13	45,771,200 - 45,771,210	Zv9	ZFIN_Zv9	BurgessLin
	13		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
w144	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	13		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
13	102.9 cM	runt1	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z11423	SSLP	13	44.0 cR	Burns et al., 2002	Burns et al.. (2002) used the T51 RH panel to map runxb between z11423 and EST fc33c02 on linkage group 13.
fc33c02	EST	13	5.0 cR	Burns et al., 2002	Burns et al.. (2002) used the T51 RH panel to map runxb between z11423 and EST fc33c02 on linkage group 13.

OTHER MAPPING INFORMATION: No data available

Genomic Feature w144 is an allele of runx3