ZFIN ID: ZDB-GENE-010226-2

ZFIN ID: ZDB-GENE-010226-2

Mapping Details

Gene Name:	gdnf family receptor alpha 1a
Symbol:	gfra1a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	13	23,357,672 - 23,650,979	GRCz12tu
NCBI Map Viewer	13	23,357,672 - 23,650,979	GRCz12tu
Ensembl	13	20,515,692 - 20,519,001	GRCz11
NCBI Map Viewer	13	20,392,656 - 20,518,632	GRCz11
NCBI Map Viewer	13	20,392,656 - 20,518,632	GRCz11
NCBI Map Viewer	13	20,392,656 - 20,518,632	GRCz11
UCSC	13	-	GRCz11
Vega	13	20,384,710 - 20,388,019	GRCv10

Mapped Clones containing gfra1a
CH1073-126C3	Chr: 13 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa8781	13	23,535,101	GRCz12tu	DIRECT		Sealy et al., 2025
	13	20,425,258	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	13	20,326,546	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	13	20,624,807	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa9341	13	23,508,751	GRCz12tu	DIRECT		Sealy et al., 2025
	13	20,401,223	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	13	20,270,241	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	13	20,530,350	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa14181	13	23,650,041	GRCz12tu	DIRECT		Sealy et al., 2025
	13	20,518,090	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	13	20,387,108	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	13	20,656,756	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa22273	13	20,425,265	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	13	20,326,539	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	13	20,624,800	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa22274	13	23,649,935	GRCz12tu	DIRECT		Sealy et al., 2025
	13	20,517,984	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	13	20,387,002	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	13	20,656,650	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa42179	13	23,650,013	GRCz12tu	DIRECT		Sealy et al., 2025
	13	20,518,062	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	13	20,387,080	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	13	20,656,728	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa8781	13		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa9341	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	13		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
sa14181	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	13		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sa22273	13		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sa22274	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	13		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
sa42179	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	13		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
13	43.0 cM	gfra1a	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z15438	SSLP	13	19.72 cR	Shepherd et al., 2001	Shepherd et al. (2001. Dev. Biol. 231:420-435) report mapping gfra1a to LG 13, ...

OTHER MAPPING INFORMATION: No data available

Genomic Feature sa8781 is an allele of gfra1a