ZFIN ID: ZDB-GENE-081022-176

Mapping Details

Gene Name:	VPS54 subunit of GARP complex
Symbol:	vps54

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	1	58,494,099 - 58,526,852	GRCz12tu
NCBI Map Viewer	1	58,494,099 - 58,526,852	GRCz12tu
Ensembl	1	55,010,620 - 55,044,279	GRCz11
NCBI Map Viewer	1	55,011,549 - 55,044,256	GRCz11
UCSC	1	-	GRCz11
Vega	1	54,332,969 - 54,366,628	GRCv10

Mapped Clones containing vps54
CH1073-300F3	Chr: 1 Details
CH1073-343L23	Chr: 1 Details
CH211-196H16	Chr: 1 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa2004	1	58,507,777	GRCz12tu	DIRECT		Sealy et al., 2025
	1	55,025,237	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	1	54,347,586	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	1	55,564,019	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa32784	1	58,496,305	GRCz12tu	DIRECT		Sealy et al., 2025
	1	55,013,755	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	1	54,336,104	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	1	55,553,165	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa32785	1	58,520,035	GRCz12tu	DIRECT		Sealy et al., 2025
	1	55,037,495	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	1	54,359,844	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	1	55,576,823	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa2004	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa32784	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa32785	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
zko1112a	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
zko1112b	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available

OTHER MAPPING INFORMATION: No data available

Genomic Feature sa2004 is an allele of vps54