ZFIN ID: ZDB-GENE-010724-2

Mapping Details

Gene Name:	calpain 9
Symbol:	capn9

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	1	57,361,182 - 57,387,187	GRCz12tu
NCBI Map Viewer	1	57,361,182 - 57,387,187	GRCz12tu
Ensembl	1	53,881,844 - 53,907,092	GRCz11
NCBI Map Viewer	1	53,881,844 - 53,907,047	GRCz11
UCSC	1	-	GRCz11
Vega	1	53,222,101 - 53,247,349	GRCv10

Mapped Clones containing capn9
CH211-52O18	Chr: 1 Details
CH73-59B17	Chr: 1 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa25682	1	57,370,560	GRCz12tu	DIRECT		Sealy et al., 2025
	1	53,891,034	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	1	53,231,291	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	1	54,457,788	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa39702	1	57,367,243	GRCz12tu	DIRECT		Sealy et al., 2025
	1	53,887,717	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	1	53,227,974	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	1	54,454,471	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa25682	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa39702	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
zko1072a	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
zko1072b	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	1		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS: No data available

Markers Encoded by capn9
MGC:92451 Chr: 1 Details
fb77d06 Chr: 1 Details

Genomic Feature sa39702 is an allele of capn9