ZFIN ID: ZDB-GENE-050731-5

Mapping Details

Gene Name: VPS11 core subunit of CORVET and HOPS complexes
Symbol: vps11
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 10 29,751,029 - 29,768,556 GRCz11
Ensembl 10 29,751,029 - 29,768,556 GRCz11
Vega 10 29,864,689 - 29,882,216 GRCv10
NCBI Map Viewer 10 29,750,952 - 29,768,526 GRCz11
UCSC 10 - GRCz11
Mapped Clones containing vps11
CH73-261I21 Chr: 10 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa6174 10 29,759,232 GRCz11 Busch-Nentwich et al., 2013
10 29,872,892 GRCz10 Busch-Nentwich et al., 2013
10 30,650,488 Zv9 Busch-Nentwich et al., 2013
sa12276 10 29,768,360 GRCz11 Busch-Nentwich et al., 2013
10 29,882,020 GRCz10 Busch-Nentwich et al., 2013
10 30,659,616 Zv9 Busch-Nentwich et al., 2013
sa34930 10 29,754,516 GRCz11 Busch-Nentwich et al., 2013
10 29,868,176 GRCz10 Busch-Nentwich et al., 2013
10 30,645,772 Zv9 Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z9574 SSLP 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
z7504 SSLP 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
z25833 SSLP 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
dlg2 GENE 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
wsu1 Feature 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.

OTHER MAPPING INFORMATION
Chr 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1  ...
Genomic Feature wsu1 is an allele of vps11
Marker Type Chr Distance Publication / Person Comments
dlg2 GENE 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
vps11 GENE 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
z9574 SSLP 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
z7504 SSLP 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
z25833 SSLP 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1 (platinum) to Chr 10 by bulk segregant analysis.
Genomic Feature wsu1 is an allele of vps11
Chr 10 Thomas et al., 2011 Thomas et al. (2011 Invest. Ophthalmol. Vis. Sci.52, 3119-3128) mapped vps11wsu1  ...
Genomic Feature sa34930 is an allele of vps11
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