ZFIN ID: ZDB-GENE-040513-7

Mapping Details

Gene Name: cadherin-related 23
Symbol: cdh23
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 13 46,343,904 - 46,817,080 GRCz12tu
NCBI Map Viewer 13 46,343,904 - 46,817,080 GRCz12tu
NCBI Map Viewer 13 42,762,194 - 43,213,012 GRCz11
NCBI Map Viewer 13 42,762,194 - 43,213,012 GRCz11
Vega 13 42,636,166 - 42,885,796 GRCv10
Mapped Clones containing cdh23
CH211-236A3 Chr: 13 Details
DKEY-261I20 Chr: 13 Details
CH211-180G15 Chr: 13 Details
DKEY-223L5 Chr: 13 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
nl9 13 43,085,671 GRCz11 DIRECT Obholzer et al., 2012
omf109 13 46,501,965 - 46,501,966 GRCz12tu DIRECT Patterson et al., 2024
sa6329 13 46,681,548 GRCz12tu DIRECT Sealy et al., 2025
13 43,085,754 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 42,961,188 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 43,745,982 Zv9 DIRECT Busch-Nentwich et al., 2013
sa28193 13 46,776,352 GRCz12tu DIRECT Sealy et al., 2025
13 43,180,344 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 43,058,581 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 43,843,465 Zv9 DIRECT Busch-Nentwich et al., 2013
sa28194 13 46,796,715 GRCz12tu DIRECT Sealy et al., 2025
13 43,200,565 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 43,078,802 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 43,863,686 Zv9 DIRECT Busch-Nentwich et al., 2013
sa31961 13 46,718,994 GRCz12tu DIRECT Sealy et al., 2025
13 43,123,138 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 43,001,375 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 43,786,259 Zv9 DIRECT Busch-Nentwich et al., 2013
sa35577 13 46,711,696 GRCz12tu DIRECT Sealy et al., 2025
13 43,115,840 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 42,994,077 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 43,778,961 Zv9 DIRECT Busch-Nentwich et al., 2013
sa35578 13 46,751,036 GRCz12tu DIRECT Sealy et al., 2025
13 43,155,160 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 43,033,397 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 43,818,281 Zv9 DIRECT Busch-Nentwich et al., 2013
sa42289 13 46,758,332 GRCz12tu DIRECT Sealy et al., 2025
13 43,162,324 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 43,040,561 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 43,825,445 Zv9 DIRECT Busch-Nentwich et al., 2013
sa45500 13 46,755,508 GRCz12tu DIRECT Sealy et al., 2025
13 43,159,500 GRCz11 DIRECT Busch-Nentwich et al., 2013
13 43,037,737 GRCz10 DIRECT Busch-Nentwich et al., 2013
13 43,822,621 Zv9 DIRECT Busch-Nentwich et al., 2013
zf4078 13 43,055,196 - 43,055,229 GRCz11 DIRECT Yang et al., 2023
zf4079 13 43,055,074 - 43,055,216 GRCz11 DIRECT Yang et al., 2023
la012407Tg 13 43,502,510 - 43,502,520 Zv9 ZFIN_Zv9 BurgessLin
nl9 13 GRCz11 GENERAL_LOAD load data [singleton]
cdh23_unspecified 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
la012407Tg 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
nl9 13 GRCz11 OTHER_MAPPING linkagesDirectMem2
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING linkagesDirectMem1
ru609 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa6329 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa28193 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa28194 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa31961 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa35577 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa35578 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa42289 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa45500 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
t23576 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
tc242b 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
tc317e 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
te370e 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
tj264 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
tz300 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
zf4078 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
zf4079 13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
13 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
nl9 Feature 13 Obholzer et al., 2012 Obholzer,et al. (2012. Development 139(22):4280-4290.) reports mapping mutant  ...

OTHER MAPPING INFORMATION
Chr 13 Söllner et al., 2004 The sputnik tj264a locus was mapped to LG13 between Z17223 and z26404 by Sollner et al (Nature  ...
Chr 13 Obholzer et al., 2012 Obholzer,et al. (2012. Development 139(22):4280-4290.) reports mapping mutant nl9 to cdh23 on  ...
Genomic Feature nl9 is an allele of cdh23
Marker Type Chr Distance Publication / Person Comments
cdh23 GENE 13 Obholzer et al., 2012 Obholzer,et al. (2012. Development 139(22):4280-4290.) reports mapping mutant  ...
Genomic Feature nl9 is an allele of cdh23
Chr 13 Obholzer et al., 2012 Obholzer,et al. (2012. Development 139(22):4280-4290.) reports mapping mutant nl9 to cdh23 on  ...
Genomic Feature sa31961 is an allele of cdh23
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