ZFIN ID: ZDB-GENE-030131-968

Mapping Details

Gene Name: collagen, type V, alpha 3a
Symbol: col5a3a
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 3 56,308,736 - 56,456,817 GRCz12tu
NCBI Map Viewer 3 56,308,736 - 56,456,817 GRCz12tu
Ensembl 3 53,773,256 - 53,919,463 GRCz11
NCBI Map Viewer 3 53,773,071 - 53,920,220 GRCz11
UCSC 3 - GRCz11
Vega 3 53,518,593 - 53,664,800 GRCv10
Mapped Clones containing col5a3a
CH211-155J8 Chr: 3 Details
CH73-310M20 Chr: 3 Details
DKEY-58L12 Chr: 3 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa20148 3 56,431,784 GRCz12tu DIRECT Sealy et al., 2025
3 53,895,176 GRCz11 DIRECT Busch-Nentwich et al., 2013
3 53,640,513 GRCz10 DIRECT Busch-Nentwich et al., 2013
3 54,746,608 Zv9 DIRECT Busch-Nentwich et al., 2013
sa26152 3 56,428,888 GRCz12tu DIRECT Sealy et al., 2025
3 53,892,717 GRCz11 DIRECT Busch-Nentwich et al., 2013
3 53,638,054 GRCz10 DIRECT Busch-Nentwich et al., 2013
3 54,743,712 Zv9 DIRECT Busch-Nentwich et al., 2013
sa40170 3 56,431,449 GRCz12tu DIRECT Sealy et al., 2025
3 53,894,842 GRCz11 DIRECT Busch-Nentwich et al., 2013
3 53,640,179 GRCz10 DIRECT Busch-Nentwich et al., 2013
3 54,746,273 Zv9 DIRECT Busch-Nentwich et al., 2013
sa45158 3 56,440,678 GRCz12tu DIRECT Sealy et al., 2025
3 53,904,071 GRCz11 DIRECT Busch-Nentwich et al., 2013
3 53,649,408 GRCz10 DIRECT Busch-Nentwich et al., 2013
3 54,755,502 Zv9 DIRECT Busch-Nentwich et al., 2013
la024299Tg 3 54,608,184 - 54,608,194 Zv9 ZFIN_Zv9 BurgessLin
la028946Tg 3 54,563,608 - 54,563,618 Zv9 ZFIN_Zv9 BurgessLin
la024299Tg 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
la028946Tg 10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa20148 10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa26152 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa40170 10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa45158 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
10 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS: No data available

OTHER MAPPING INFORMATION
Markers Encoded by col5a3a
fb54e07 Chr: 10 Details
Genomic Feature sa20148 is an allele of col5a3a
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