ZFIN ID: ZDB-GENE-010430-2

Mapping Details

Gene Name: VPS52 subunit of GARP complex
Symbol: vps52
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 19 20,879,476 - 20,901,997 GRCz12tu
NCBI Map Viewer 19 20,879,476 - 20,901,997 GRCz12tu
Ensembl 19 18,627,100 - 18,648,945 GRCz11
NCBI Map Viewer 19 18,627,288 - 18,649,750 GRCz11
Vega 19 19,164,247 - 19,186,092 GRCv10
Mapped Clones containing vps52
DKEY-179E8 Chr: 19 Details
CH73-389O5 Chr: 19 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa4801 19 20,890,336 GRCz12tu DIRECT Sealy et al., 2025
19 18,638,150 GRCz11 DIRECT Busch-Nentwich et al., 2013
19 19,175,297 GRCz10 DIRECT Busch-Nentwich et al., 2013
19 18,330,062 Zv9 DIRECT Busch-Nentwich et al., 2013
sa18372 19 20,891,136 GRCz12tu DIRECT Sealy et al., 2025
19 18,638,950 GRCz11 DIRECT Busch-Nentwich et al., 2013
19 19,176,097 GRCz10 DIRECT Busch-Nentwich et al., 2013
19 18,330,862 Zv9 DIRECT Busch-Nentwich et al., 2013
sa23494 19 20,891,087 GRCz12tu DIRECT Sealy et al., 2025
19 18,638,901 GRCz11 DIRECT Busch-Nentwich et al., 2013
19 19,176,048 GRCz10 DIRECT Busch-Nentwich et al., 2013
19 18,330,813 Zv9 DIRECT Busch-Nentwich et al., 2013
sa43253 19 20,888,983 GRCz12tu DIRECT Sealy et al., 2025
19 18,636,797 GRCz11 DIRECT Busch-Nentwich et al., 2013
19 19,173,944 GRCz10 DIRECT Busch-Nentwich et al., 2013
19 18,328,709 Zv9 DIRECT Busch-Nentwich et al., 2013
sa4801 19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
19 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa18372 19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
19 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa23494 19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
19 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa43253 19 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
19 2046.0 cR sacm2l Goodfellow T51 (T51) Geisler, Robert Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION
Markers Encoded by vps52
fb94c11 Chr: 19 Details
Genomic Feature sa18372 is an allele of vps52
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