ZFIN ID: ZDB-GENE-991207-22

Mapping Details

Gene Name: junction plakoglobin a
Symbol: jupa
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 11 12,091,550 - 12,152,590 GRCz12tu
NCBI Map Viewer 11 12,091,550 - 12,152,590 GRCz12tu
Ensembl 11 11,719,575 - 11,781,232 GRCz11
NCBI Map Viewer 11 11,719,610 - 11,781,232 GRCz11
UCSC 11 - GRCz11
Vega 11 11,735,954 - 11,797,611 GRCv10
Mapped Clones containing jupa
DKEY-8O15 Chr: 11 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
ihb860 11 11,768,782 - 11,768,921 GRCz11 DIRECT Zebrafish Nomenclature Committee
ihb861 11 11,768,787 - 11,768,921 GRCz11 DIRECT Zebrafish Nomenclature Committee
sa12692 11 12,148,641 GRCz12tu DIRECT Sealy et al., 2025
11 11,777,301 GRCz11 DIRECT Busch-Nentwich et al., 2013
11 11,793,680 GRCz10 DIRECT Busch-Nentwich et al., 2013
11 11,898,677 Zv9 DIRECT Busch-Nentwich et al., 2013
sa12961 11 12,144,859 GRCz12tu DIRECT Sealy et al., 2025
11 11,773,605 GRCz11 DIRECT Busch-Nentwich et al., 2013
11 11,789,984 GRCz10 DIRECT Busch-Nentwich et al., 2013
11 11,894,981 Zv9 DIRECT Busch-Nentwich et al., 2013
sa14171 11 12,146,825 GRCz12tu DIRECT Sealy et al., 2025
11 11,775,577 GRCz11 DIRECT Busch-Nentwich et al., 2013
11 11,791,956 GRCz10 DIRECT Busch-Nentwich et al., 2013
11 11,896,953 Zv9 DIRECT Busch-Nentwich et al., 2013
sa31818 11 12,144,980 GRCz12tu DIRECT Sealy et al., 2025
11 11,773,726 GRCz11 DIRECT Busch-Nentwich et al., 2013
11 11,790,105 GRCz10 DIRECT Busch-Nentwich et al., 2013
11 11,895,102 Zv9 DIRECT Busch-Nentwich et al., 2013
la011634Tg 11 11,879,001 - 11,879,011 Zv9 ZFIN_Zv9 BurgessLin
ct520aGt 11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
ihb860 11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
ihb861 11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
la011634Tg 11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa12692 11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa12961 11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa14171 11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa31818 11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
11 35.5 cM jup Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION
Markers Encoded by jupa
fb11b06 Chr: 11 Details
Genomic Feature sa14171 is an allele of jupa
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.