ZFIN ID: ZDB-GENE-021125-1

ZFIN ID: ZDB-GENE-021125-1

Mapping Details

Gene Name:	SNF2 related chromatin remodeling ATPase 5
Symbol:	smarca5

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	1	56,151,612 - 56,180,337	GRCz12tu
NCBI Map Viewer	1	56,151,612 - 56,180,337	GRCz12tu
Ensembl	1	52,792,439 - 52,820,954	GRCz11
NCBI Map Viewer	1	52,792,439 - 52,820,954	GRCz11
UCSC	1	Based on NM_001081629	GRCz11
Vega	1	52,157,701 - 52,186,216	GRCv10

Mapped Clones containing smarca5
CH73-251A15	Chr: 1 Details
DKEY-76A14	Chr: 1 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	Citations
hi550Tg	1	52,792,537 - 52,792,538	GRCz11	DIRECT	ZFIN Curated Data
sa11295	1	56,175,905	GRCz12tu	DIRECT	Sealy et al., 2025
	1	52,816,522	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	1	52,181,784	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	1	53,312,213	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa14090	1	56,156,643	GRCz12tu	DIRECT	Sealy et al., 2025
	1	52,797,470	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	1	52,162,732	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	1	53,293,161	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa19604	1	56,157,767	GRCz12tu	DIRECT	Sealy et al., 2025
	1	52,798,594	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	1	52,163,856	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	1	53,294,285	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa32777	1	56,173,936	GRCz12tu	DIRECT	Sealy et al., 2025
	1	52,814,553	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	1	52,179,815	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	1	53,310,244	Zv9	DIRECT	Busch-Nentwich et al., 2013
hi550Tg	1		GRCz11	OTHER_MAPPING	ZFIN Curated Data
zko1049a	1		GRCz11	OTHER_MAPPING	ZFIN Curated Data
zko1049b	1		GRCz11	OTHER_MAPPING	ZFIN Curated Data

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
1	6544.0 cR	smarca5	Goodfellow T51 (T51)	Zhou, Yi	Data
1	90.4 cM	af506218	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Chr 1

Adam Amsterdam (pers. comm.) reports that smarca5 is mapped to LG1 on the T51 mapping panel.

Markers Encoded by smarca5
fb26d12 Chr: 1 Details

Genomic Feature sa14090 is an allele of smarca5