ZFIN ID: ZDB-GENE-020802-4

Mapping Details

Gene Name: calcium/calmodulin-dependent serine protein kinase a
Symbol: caska
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 9 35,055,418 - 35,299,400 GRCz12tu
NCBI Map Viewer 9 35,055,418 - 35,299,400 GRCz12tu
Ensembl 9 33,366,683 - 33,477,588 GRCz11
NCBI Map Viewer 9 33,365,307 - 33,608,967 GRCz11
NCBI Map Viewer 9 33,365,307 - 33,608,967 GRCz11
UCSC 9 - GRCz11
Vega 9 33,555,937 - 33,666,842 GRCv10
Mapped Clones containing caska
CH211-266E3 Chr: 9 Details
DKEY-216E24 Chr: 9 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa1081 9 35,080,140 GRCz12tu DIRECT Sealy et al., 2025
9 33,390,013 GRCz11 DIRECT Busch-Nentwich et al., 2013
9 33,579,267 GRCz10 DIRECT Busch-Nentwich et al., 2013
9 34,423,321 Zv9 DIRECT Busch-Nentwich et al., 2013
sa11434 9 35,078,127 GRCz12tu DIRECT Sealy et al., 2025
9 33,388,000 GRCz11 DIRECT Busch-Nentwich et al., 2013
9 33,577,254 GRCz10 DIRECT Busch-Nentwich et al., 2013
9 34,421,308 Zv9 DIRECT Busch-Nentwich et al., 2013
sa14058 9 35,078,199 GRCz12tu DIRECT Sealy et al., 2025
9 33,388,072 GRCz11 DIRECT Busch-Nentwich et al., 2013
9 33,577,326 GRCz10 DIRECT Busch-Nentwich et al., 2013
9 34,421,380 Zv9 DIRECT Busch-Nentwich et al., 2013
sa17097 9 35,129,480 GRCz12tu DIRECT Sealy et al., 2025
9 33,439,277 GRCz11 DIRECT Busch-Nentwich et al., 2013
9 33,628,531 GRCz10 DIRECT Busch-Nentwich et al., 2013
9 34,472,585 Zv9 DIRECT Busch-Nentwich et al., 2013
sa34684 9 35,106,604 GRCz12tu DIRECT Sealy et al., 2025
9 33,416,463 GRCz11 DIRECT Busch-Nentwich et al., 2013
9 33,605,717 GRCz10 DIRECT Busch-Nentwich et al., 2013
9 34,449,771 Zv9 DIRECT Busch-Nentwich et al., 2013
sa41463 9 35,096,976 GRCz12tu DIRECT Sealy et al., 2025
9 33,406,851 GRCz11 DIRECT Busch-Nentwich et al., 2013
9 33,596,105 GRCz10 DIRECT Busch-Nentwich et al., 2013
9 34,440,159 Zv9 DIRECT Busch-Nentwich et al., 2013
la016562Tg 9 34,506,860 - 34,506,870 Zv9 ZFIN_Zv9 BurgessLin
la026929Tg 9 34,452,907 - 34,452,917 Zv9 ZFIN_Zv9 BurgessLin
la016562Tg 9 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
la026929Tg 9 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa1081 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa11434 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
9 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa14058 9 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa17097 9 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa34684 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa41463 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
9 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
uab459 9 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
9 77.8 cM cask Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION
Markers Encoded by caska
fb70g06 Chr: 9 Details
Genomic Feature la026929Tg is an allele of caska
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