ZFIN ID: ZDB-GENE-011207-1

Mapping Details

Gene Name:	SRY-box transcription factor 10
Symbol:	sox10

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	3	1,492,174 - 1,501,255	GRCz11
Ensembl	3	1,492,174 - 1,501,255	GRCz11
Vega	3	2,013,057 - 2,022,144	GRCv10
NCBI Map Viewer	3	1,492,174 - 1,501,252	GRCz11
UCSC	3	-	GRCz11

Mapped Clones containing sox10
DKEY-201F15	Chr: 3 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
baz1	3	1,495,001	GRCz11	Carney et al., 2006
m618	3	1,495,077	GRCz11	Dutton et al., 2001
tw2	3	1,499,549	GRCz11	Dutton et al., 2001
tw11	3	1,499,549	GRCz11	Dutton et al., 2001
baz1	3		GRCz11
	3		GRCz11
ci3020	3		GRCz11
	3		GRCz11
m241	3		GRCz11
	3		GRCz11
m618	3		GRCz11
	3		GRCz11
sox10_unspecified	3		GRCz11
	3		GRCz11
t3	3		GRCz11
	3		GRCz11
tw2	3		GRCz11
	3		GRCz11
tw11	3		GRCz11
	3		GRCz11
	3		GRCz11
	3		GRCz11
utr13e1	3		GRCz11
	3		GRCz11
zf3259Tg	3		GRCz11
	3		GRCz11
zf3647	3		GRCz11
	3		GRCz11
zf3648	3		GRCz11
	3		GRCz11
zf3649	3		GRCz11
	3		GRCz11
zf3650	3		GRCz11
	3		GRCz11

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z8492	SSLP	3	0.0 cR	Dutton et al., 2001	Dutton, et al. (2001. Dev 128:4113-4125.) report mapping sox10 to LG3 at the same location as z8492 on the LN54 mapping panel.

Genomic Feature tw11 is an allele of sox10

Marker	Type	Chr	Distance	Publication / Person	Comments
z13387	SSLP	3	1.5 cM	Dutton et al., 2001	Dutton, et al. (2001. Dev 128:4113-4125.) crossed cls^tw11 heterozygous fish with wild-type WIK to produce a reference mapping cross. Genetic mapping of 274 meioses localized cls between z872 and z13387 on LG3.
z872	SSLP	3	2.4 cM	Dutton et al., 2001	Dutton, et al. (2001. Dev 128:4113-4125.) crossed cls^tw11 heterozygous fish with wild-type WIK to produce a reference mapping cross. Genetic mapping of 274 meioses localized cls between z872 and z13387 on LG3.

Genomic Feature utr13e1 is an allele of sox10