ZFIN ID: ZDB-GENE-030131-3275

Mapping Details

Gene Name: cleavage and polyadenylation specific factor 3
Symbol: cpsf3
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 20 32,365,146 - 32,380,236 GRCz12tu
NCBI Map Viewer 20 32,365,146 - 32,380,236 GRCz12tu
Ensembl 20 29,619,820 - 29,633,507 GRCz11
NCBI Map Viewer 20 29,619,894 - 29,633,452 GRCz11
UCSC 20 - GRCz11
Vega 20 29,716,941 - 29,730,628 GRCv10
Mapped Clones containing cpsf3
DKEY-81B15 Chr: 20 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
hi2666Tg 20 29,633,327 - 29,633,328 GRCz11 DIRECT ZFIN Curated Data
sa11209 20 32,368,450 GRCz12tu DIRECT Sealy et al., 2025
20 29,623,122 GRCz11 DIRECT Busch-Nentwich et al., 2013
20 29,720,243 GRCz10 DIRECT Busch-Nentwich et al., 2013
20 29,649,030 Zv9 DIRECT Busch-Nentwich et al., 2013
sa23727 20 32,373,075 GRCz12tu DIRECT Sealy et al., 2025
20 29,626,129 GRCz11 DIRECT Busch-Nentwich et al., 2013
20 29,723,250 GRCz10 DIRECT Busch-Nentwich et al., 2013
20 29,652,037 Zv9 DIRECT Busch-Nentwich et al., 2013
sa23728 20 32,380,057 GRCz12tu DIRECT Sealy et al., 2025
20 29,633,320 GRCz11 DIRECT Busch-Nentwich et al., 2013
20 29,730,441 GRCz10 DIRECT Busch-Nentwich et al., 2013
20 29,659,228 Zv9 DIRECT Busch-Nentwich et al., 2013
sa37059 20 32,375,202 GRCz12tu DIRECT Sealy et al., 2025
20 29,628,239 GRCz11 DIRECT Busch-Nentwich et al., 2013
20 29,725,360 GRCz10 DIRECT Busch-Nentwich et al., 2013
20 29,654,147 Zv9 DIRECT Busch-Nentwich et al., 2013
la021523Tg 20 29,649,042 - 29,649,052 Zv9 ZFIN_Zv9 BurgessLin
la021524Tg 20 29,658,712 - 29,658,722 Zv9 ZFIN_Zv9 BurgessLin
hi2666Tg 20 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
la021523Tg 20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
20 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
la021524Tg 20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
20 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa11209 20 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa23727 20 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa23728 20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
20 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa37059 20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
20 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
20 86.7 cM cpsf3 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION
Markers Encoded by cpsf3
fc32f10 Chr: 20 Details
Genomic Feature hi2666Tg is an allele of cpsf3
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