Genomic Feature
ty130b
- ID
- ZDB-ALT-980203-1341
- Name
- ty130b
- Synonyms
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one point mutation (1)
- Protocol
- adult males treated with ENU
- Lab of Origin
- Nüsslein-Volhard Lab
- Current Source
- European Zebrafish Resource Center (EZRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 9: 17058469 (GRCz11) (1) Details
- Nucleotide change
- A/T
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- None
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
GGTTGTAAAAGTGCCATTTACTTCTCTAAACAGCAGCTGGTCAGATTTTTCACCATGAATTCGGCCAATGAATTTATTCATTTTTGGTATCATTTTATTTCAGTTGTTTGCACTCACTATTACTGGTTTTATTTAGTTGTAAATTTTCATTTATTGTAAAATCATTTCATTTTATTTCAGTTAACATTTTCGGTGACTAAGGGTTTAAATTTCTAATTTATTATTATTATTATACTTTTATTATTTTACTAATAAAACTTTAGGTTTCATTTACTAAAATAAAAGATATTAATGATATTAAAATGTATTTTTATTTGCTCTATATGCCATCGCATTAATCATCTGTACCTGGATTGCTGGGGCAGCAGACAGAGCCTCAGTGAAGCAAATCATGCACATATCATCAGCGTCCTGTTTCAAACAGGTTGCGGTTTTGTCACAACCATGCAGACAGGGAAGACACAGATCCTCATTTTTGACCCCTCCACATGGGTGACCAC
A/T TGGATGAGTCTTACTGCAGGCCAGTTTTGCGTACTCCTACAAACAAGAAGTAACAAAACCATTGTGTCTGAGATCACTAATTTCCAGTTTAAAACAAAACAAAAAGAACCCATCTTGAGTGCATACCTGACAGTCTTGGTCTGAACATACACTTCCCACTGCAGACAGTTCTGTGCCGTGCCTAGTGCCACAGAAGCGGCAGGCGTCTGAACTGCTGGAAGCTGGTTTACCTGAAGCACAATACAAAAGAGTTAGAACTAGCAGTACAATATGTAGCCTCTAATCTTTTAATAAAATATAGTTCTGTAAGTAAGATGCATCATACTGTAGATGTGACCTGGGGGTTAGCGGTCAGGAGCACAAAATATTCAAAACTCAGGACAAAAATACTCCAGAAATTGTTTATATGGTGAGGAAAAAGGGCCTTTGTTGTGAATAGCTCTATTTTTACTTGTTATTTAACATTTAAAAAACAAAAAAAACAACAATTCGAAACACAT - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| mycbp2ty130b/ty130b | Homozygous | ♀+/- ♂+/- | 7 figures  from 6 publications |
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Supplemental Information
- Genotyping protocol
- None
- Hendricks, M., Mathuru, A.S., Wang, H., Silander, O., Kee, M.Z., and Jesuthasan, S. (2008) Disruption of Esrom and Ryk identifies the roof plate boundary as an intermediate target for commissure formation. Molecular and cellular neurosciences. 37(2):271-283
- Le Guyader, S., Maier, J., and Jesuthasan, S. (2005) Esrom, an ortholog of PAM (protein associated with c-myc), regulates pteridine synthesis in the zebrafish. Developmental Biology. 277(2):378-386
- Haffter, P., Granato, M., Brand, M., Mullins, M.C., Hammerschmidt, M., Kane, D.A., Odenthal, J., van Eeden, F.J., Jiang, Y.J., Heisenberg, C.P., Kelsh, R.N., Furutani-Seiki, M., Vogelsang, E., Beuchle, D., Schach, U., Fabian, C., and Nüsslein-Volhard, C. (1996) The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio. Development (Cambridge, England). 123:1-36
- Karlstrom, R.O., Trowe, T., Klostermann, S., Baier, H., Brand, M., Crawford, A.D., Grunewald, B., Haffter, P., Hoffman, H., Meyer, S.U., Muller, B.K., Richter, S., van Eeden, F.J., Nüsslein-Volhard, C., and Bonhoeffer, F. (1996) Zebrafish mutations affecting retinotectal axon pathfinding. Development (Cambridge, England). 123:427-438
- Kelsh, R.N., Brand, M., Jiang, Y.J., Heisenberg, C.P., Lin, S., Haffter, P., Odenthal, J., Mullins, M.C., van Eeden, F.J., Furutani-Seiki, M., Granato, M., Hammerschmidt, M., Kane, D.A., Warga, R.M., Beuchle, D., Vogelsang, L., and Nüsslein-Volhard, C. (1996) Zebrafish pigmentation mutations and the processes of neural crest development. Development (Cambridge, England). 123:369-389
- Odenthal, J., Rossnagel, K., Haffter, P., Kelsh, R.N., Vogelsang, E., Brand, M., van Eeden, F.J., Furutani-Seiki, M., Granato, M., Hammerschmidt, M., Heisenberg, C.P., Jiang, Y.J., Kane, D.A., Mullins, M.C., and Nüsslein-Volhard, C. (1996) Mutations affecting xanthophore pigmentation in the zebrafish, Danio rerio. Development (Cambridge, England). 123:391-398
- Trowe, T., Klostermann, S., Baier, H., Granato, M., Crawford, A.D., Grunewald, B., Hoffman, H., Karlstrom, R.O., Meyer, S.U., Muller, B., Richter, S., Nüsslein-Volhard, C., and Bonhoeffer, F. (1996) Mutations disrupting the ordering and topographic mapping of axons in the retinotectal projection of the zebrafish, Danio rerio. Development (Cambridge, England). 123:439-450
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