Genomic Feature
s5004b
- ID
- ZDB-ALT-261008-2
- Name
- s5004b
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Wagner Lab UCSF
- Current Source
- Other Pages
-
Notes
| Comment | Citation |
|---|---|
| This line also contains the SNP rs179427066 just upstream of the mutation. The ... | Chou-Freed et al., 2026 |
- Genome Browsers
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 16: 56072025 - 56072032 (GRCz12tu) (1) Details
- Nucleotide Change
- GTTGGGGA/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 8 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
ATTCTAACAGCATTTACCTGAGGATATATACACCTGTATAGTGGTTTatgcaggtatacacacacacatctatatacCTGTGCGTGTTTACTGTTTCATCTTCACCTGGAGAGGAGGATGATGGTGATTTTCGAGGAAGAAAACACCACCAGTTTACATAAAGGAGGCTTCTAACAGCATCTATCTGAACATATCTATATTTAAAGTACATGTATGGTGGTCCTAGCGTATAAGCAGGTATACCCGCACACACCTGTGCGCATTTCCTGGTTCGTCTTCACCTGGAGAGGGTGTTGATCACCAGGAAGCAGGAACCATAGGATCTCTTCTTACATTCCTCTTCAGAAAATGCTCCAGGACTcgttaaatagtttaaaaacaaactTCACAACAGCACTAGCAGCCCTGCACAGATAATAGGAGCCTTTGCATATCGACTTCTCGCATCTTCTGAAACTTATCATGGAGCTCAAGGTGTTTATCGTGGCTTTGGGGCTCCT
GTTGGGGA/- GTTTGGTGGCCGCCAGCTCCCCGGCCGCGAGCAACGGTAAAGAGAGTTCTCATAGTGGGGTCGGTGATCACGAAAGCGCTGGTCACGGTAATCAGTCCCGGAGAGCCTTCCCGGTGTTGTCGTTTGATTATGAACACGTTCGACTGCCGTTTGAGATTTCACTATGGGTGCTGCTGGCCTCCTTGATGAAGCTGGGTGAGTGTGTtcattttgatgtatttttgcttcatttttttttattgaatacaagaataataacatcactgcattgaaaaaatacaataacaaaaaataagaaagacagagaggaaaaaaaaaaattacacagcctcaaacattaataaaaaagattgtcataagctttaagaaacttattcttcttattattattaataagcttaAGAGATTCAATATTATACGAAATTTCAACAAGGAAAGTATTAAAAACAGGTATTGTTTTTAGAaacttatttttgtgtataaaaaatttacagtgtaac - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None