Genomic Feature

ihb1021

ID
ZDB-ALT-260909-5
Name
ihb1021
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Yonghua Sun Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Browsers
Variants
Variant Type
Small Deletion
Variant Location
Chr 6: 11257760 - 11257763 (GRCz12tu) (1) Details
Nucleotide Change
CACG/-
Variant Notes
4bp deletion,Between 64bp to 67bp of the wild-type scn1lab coding sequence,  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
acacacacaaacacacgcacgcatgtTAAGACAGGACAGGGCAGCAGAGGGAAAcgtcacacagagacacacacctGACTGACACTTGTGTTTATGCGCACACGCATGCGCacgtctacacacacacacacacacacacacacatacatccctTACCTGGGATGACTGAGATAGTTTTCAAAGCTCTGAGCACTCTGAAAGTGCGGAGAGCTGACACATTGCCTAGGTTTACAAACTCAGTTACATACCTGTAGAATCAAATAGAGAGTTACCACAAACACACTCGCTCCAACTCACACAAGCGCAACCCACATGGATTCACCAGCTTTTCCTTCATCAATGTGTCCAAAACTATCCGAGAACACTCTGGGTTCATTTCTCGATTgcttattacatttaaaaaaaagaaaaataatagtaTGCATTACGGATACTCACGCCATCAGAATGACACTGAAATCCAGCCAGTTCCAGGGGTCTCTCAGGAAAGTGAACTTCCC
CACG/- CAGAAGCCCCGAGCCAGGATCTTAATCAGGGACTCGAAGGTGTAGATCCCTGTGAACGTGTATCTGAACGCACACAAGCCAAACGTCAAAAAAACGGCTTAAAACATTAAGAACAATAAAATTAGAGGGAAAATGACACATACAATAAGTTGTAAGGCGTTCATTTATTTGCTGTATTGATGAACCATTTATTACTTATTGgtttaaaggtgccctataaagAAGATCTGGGTATACCGAAAGTCcttttaaaggttcacgaaagccttgagtacttttttgagattttaacagatttgtgtgtgttgagcatcagttaagacaccgttagcacctgtcagctgtaattgtggggaaaactggagaatTTTGAGTTTTGTCATATTGTTCATATTTAAACTCTATGtttggtagtttttttttattttcaagatcttcTGCTGCTTACAATATGGCAACAAATGTCACTTAAATGGTATTCAAAGTCTCTATAAAACTGA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations