Genomic Feature

ihb996

ID
ZDB-ALT-260603-1
Name
ihb996
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Yonghua Sun Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Browsers
Variants
Variant Type
Small Deletion
Variant Location
Chr 9: 1145074 - 1145092 (GRCz12tu) (1) Details
Nucleotide Change
CCCTGATCATCCCCTCAGA/-
Variant Notes
19bp deletion,Between 305bp to 323bp of the wild-type slc15a1a coding sequence,  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
19 bp deleted in Exon 16 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
gcctaaaTCAGTCcaaatctctaaaaaaaaaaaaaaagaatagtgcATTTCTGAAATGTGCCCAGGTGAGTGAacttgacaaaccacccgtagAGACACTTCTCTATATATGCACTAGTAATTTACTATAGAACATTTACTATGGAAGTGAATTgatcttttaaaatgtacagtCTAATTATGATTTTATCCTCAGAAAACCTTGCCGAATTTCCCATCATCCTCTGAGAGCCAGCTGAAGGTGGTGAATATGCACAGCGAGTCTCTCATAGTGACTGTGCCGTCCCAAGAGCCTCTACTGATCGGCTCATTTGAGGTACAGCATACATCTAAACACACGACTGCTGTTTCACACTGGTGTTTTACCATCTCCTCACATGTTGTTTTTCCACAGAGCAGTCCAGATTACATTACGTTTGACCAGCAGGACATCAGGTTAGCCTTTAACACAACTCCTGAGATCAATAAAGATTTGAGTTTAATCAAAGGCAGCCGTCAGA
CCCTGATCATCCCCTCAGA/- ACCGGCTGAGATGTATCTGGTGAGTGAGCTCCAGGCAtttcataaacaaaaacaaaacagaaacaaaactgtCAAGGCTTTGACCAcacataaaaatactatagtaatttgtaggaaatactacagtgtttttgataTGTGCTATAGTAAAATGTGTTATACTGTATAATAATGAGTGAATGCTGCAACATAATGTAGTATTAACGATAGTGAACTGATCAACTGTGATGATTATTgtagtaaatgttattttttaactaGTATTCGATATACTATtagatatcattcattcattcattttcttgtcggcttagtccctttattaatctttttttaattacgtatccagcaagtttttatgcagaggatgcccttccagccgcaacccatctctggaaaaactATAAGATGTATTAGAtatatttacacttttttgtaaCCAATCACACTCATTTCTGTTGAGCTAGCCTAGCTAAAAACTGATAAAAACTAGCCCaggg
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations