Genomic Feature

sus206

ID
ZDB-ALT-260304-6
Name
sus206
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Yanchao Han Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Browsers
Variants
Variant Type
Small Deletion
Variant Location
Chr 18: 51911243 - 51915736 (GRCz12tu) (1) Details
Nucleotide Change
CCAGGAGGGTCCCAGTCAGACTCATGGAAAGCTGGACAGCCTTCTGGAGCCTAGTTTGGCCCATACCATCCAGAACCTCCTGCTAACCCGCCTGGGCTTACAGTCGCACCCCAACCCCAGTACAGAGGCACAAGTTCCCCAGTATCTTCTGGACTTGTATCGATTCCACACTCAACAGTACCATCTCATCGAGGACCCAGAATTTAGTTACCCCTCAAAGCATGTGCAAGGAGCCAACACAGTCCGATGCTTTCACCACACAGGTACAGCATGAGCAGTTATTGCACAGTCAGGAGTGCCCAATCCTGGTTCCTGGAGATCTACCTTCCAGCAAAGTCCAGCTCTGATGCAACTTTGATCGAACCCACCTGTATTTAATTACCAAGTGCTCCTTCGGGTCCTACTTATTTTGTTTAGTTGTGTTTGATCAGGGTTGGAGCTGAACTCTGCAGAAAGGTAGATCTCCAGGAACAGGACTGGGTACCTAGGTCATGGAGAACACAGATTTCCCTTGGTAGTCAAACTAATTCAGGCCCAATCCCAATTCTACCACTTAGCCCTTCCACTTACATCTACCTCTCGTTTTGCGCATTCACGCCAAGCAGTAGGGGCGTCCCAATTCTCTTAAGCTTGAAGGCTTAGGGCTAAGGGGAACGGGTGAATAGCCCTTTGAAAGAAGATTTTTACGAAAATAGAATTGGGATTGGGCCTTAATTTACCACAAGCACAGCACAGAGATGTGAGGAGGTTATTTAACCTTCTGTAGGTGCCAGGATATGATACCTGTGCATTCAATATTTTCATATCACTTTATTTCGGTGGTCCTTATTGCACATTATGTTGACCAAGTTGTATTGCAACTACATGCCACCTAATTTTTATTAAAGTGTCAGTATGCTTAAAGCAGGGATGGGCAAACCTGGTCCTGTAGAGCCGGTGTCCTGCAGAGTTTAGCTTCAACCCTACTAAAGCACACCTGCCTGTAGCGATATTGAAGACACAAATTAGCTTGTTCAGGTGTGTTTGATTACTGCAGAGACACCGGCCCTTGAGGAAAGAGTTTGCCCATCCAGTATACTTTTAAATCTGTTGGCACTGCCCCACCAACAGACATTCTCCTGACTATAAGAAACATTGCAAGTACATGTTAACTTAAACTAATCCTAACATTGCAGTCTACCAATACTCTAATGAGAATTATTTGGCATCCCTGCTGGAAAATCCAGCTCAAACCAGCCTAGGCTGATTGCATGGTTTTAGCTGGTTGACCAGGCTGGTTTTAGAGGGGTTTTGGCCATTTCCAGGCTGGTTTCCAGCCATTTCCAGCCTGATCTTAGCTGGTCAGGATGGAAAATGACCAGCTAAATCCAGCTAAAACCAACTTGACCAGCCTGGTTTAAGCTGGACAAAGCTGGTTTTGGCTGGACTTCCAGCTTGGCTAGGCTGGTCAAGCTGGTTTTAGCTGGTCATCTCCCAGCCTGACCAGCTAAGACCAGGCTGAAATGGCTAGAAACCAGCCTGGAAGTGGCCAAAACCCCTCTAAAACCAGGTTGGTCGACCAGCTAAAACCAGCGAACCAGCCTAGGCTGGTTTAAGCTGGATTTTCCAGCAGCGATGTTGTTACATAGTAACTTAAAACCAACAAAATATGTTAAAGGGACCATCTAAATAAAGCGATACTAGTTTTTCAGATATCTTGAAGATATTGTTGGCACCTTGGAACAGGTTAAAAAGCAAATCAACTTATTTTCAAAGCTGCTCTAAGCAAATTATGTGCATTTATTGTTTAGTAGCACACTGATGCCTTTGCAAAATTGTGTTTCTTTCTTAGAGGTTTTGTCTTTTTTTTATTCCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTCTTAAACCAAGAAGCTTTTTCTTGTAAATTAAAGATGATTGTATGTTTTTCAGAAATAACGAGCCAAAATTAAGCGAGTTTTTCTTTCAAACAAGCAAAATGATCTGCCAGTGGGTTAGCAAAATAATCATATTCTAAACTAAACACAAGATTAGGTAACACTTTATTTTGATGGTCTATTTGAGTATTAGTAGACTGTCTGCTTAATATGTGTTAATACAGACATTTAACTGGTGTAATGTCAACTTACACCAGTGGTGTCCAAACTCAGTCCTGGAGGGCCGGTGTCCTGGAGAGTTTAGCTCCAACCCTAATCGAACACACATGAACCAGATAATCAAGCTCTTTGTAGATATACTAGAAACTTCCTGCAGGTGTTTTGAAGCAAGTTAGAGCTAAATTCAGCCGGACACCAGCCCTCCAGGACTGAGTTTGGACATGCCTGACTTGCACTAACCCTAACTCCAACCTAAGAGTCTACTGATAATCTAATGTAGGGCTGCTCAACCCTGTTCTTGGAGATCTACCTTCCTGCAAAGTTCAGGTCCAACCCTGGTCAACACACCTGAACCAATTAATTAGGACTTGAACAGCACTTGATAAATACAGGCAGGTGTGTTTGATAAGGGTTGCAACTGAAATCTGCAGGAAGGTCGATCTCCAGGAACAGGATTGAGCACACTGGATCTAATGAGAATTAGTTGGCAATTAGATGCAATGTAACTTAAATTCAACAAACGGACCATCAAAATAAAGAGAGACACAAGATTATTTTGTTTGTTTTAAGAAAAATCTCACTTAACTTTTCCTGAAAACAAGACAATATTTTAATTGTCTAGAAAATGCTTCTTGATTTAAGAATTTTTAGATTAGATGTACATTTACATTGAGTCATTTAGCAGACGCTTTTATCCAAAGCGACTTACAAATGAGGACAAGGAAGCAATTTACACAACTATAAGAGCTTTTTTATTTTTTGTAGAAGAGTTAGCGGTAGAACCAGAGAGGCAATTGCAGATTAGGAAGTGAAGTGGAGACTAAATAGTTGATTTTTTAGTCGTTTCTTGAAGACAGCGAGTGACTCTGCCGTTCTGATGCAGTTCGGGAGTTCATTCCACCAACTGGGCAGATTGAACGCGAGCGTTCGGGAAAGTGATTTCTTCCCTCTTTGAGATGGAACCTTGAGGCGAGGTTCATTCACAGAATGTAAGTTACTGGAGGGCGCATACATCTGCAGAAGTGAGAGCAGATAAGAGAAAACCAGAAGTCACTTTGTAAGCAAACATCGAATTTGATGCGAGCAGCAACTGGCAGCCAGTGCAAACGGATGAGCAGCGGAGTGACATGTGCTCTTTCAGCTTCATTAAAGACCACTCGTGCTGCTGCGTTCTGAAGCATCTGAAGAGGTTTGATAGAGTTAGCTGGGAGCCCGGCTAGTAGAGAGTTGCAATAGTCCAGTCTGGAGAGAACAAGAGCTTGAACAAGGAGTTGAGCTGCATGTTCAGATAGGAAGGGTCGGACCTTTCTAACTTAGACTAGAAAAAAGGCAAAAGCTCTAATTATAAAACACATTTTTTTGCAGTGAACATGATGAAATGCAAGCATTTTACAACTTAAGAGCTTTCTTTTTTCCATTCAGATTCTCCGACTCCGAGTCTTCCAGAAGAGCAGAAGACCACAGTGGACGGCATCCACATAGGCTTCAACCTGTCCTCCATTCCTTCAGAAGAAAGTGTGGTGTCCGCAGAGTTACGTCTACTCCATGAAGGGTCAAGTGGAGGTTCTCACGTGGCCAGTCTTTACCTTTCCAACCATGACCCTTCATCAAAACCCATTCTGCTCCATTCACGTCAACTGACCAGAGACAGGAAGAGTGCCCAACTCTGGGAAACCTTTCCCCTGGATAGAGAAGTGTTTCAGAATTTATCCAAGACGTCAGGAAGCCTGTCTTTTATCCTGGATGTTATTCCTGATAATAACAGCAGCAGTACTCTTCCTAAAGACAGACATTTGCGAGTACGCAGATCCACATTGCAGGACGGGCCTACTTGGGAAAGGCAAAGGCCTTTATTAGTGACCTACAGTCACGATGGCCGCAGCGAGCCTTTTGTGAATCTCAATAAGCGTAAAAGCAGCCGAAGCAGGAGCAGATGGACCAGGTTTAAGGGTGATAGGGGTCAGGGCTCTGACTGGAATGAAAGGCGAGTGAAACGAAACAACAGGAGGGCCGCAAAACTCAAAAGACTCTCCCGCGCTCGTTGTCGTCGGCACCCGCTGTACGTGGACTTCAAAGATGTCGGCTGGAATAAATGGATCATAGCTCCATCTGGTTACGATGCTTTCTTTTGCCTCGGAGAGTGCCGCTTCCCACTGGCTGACCATATGAATTCATCAAGCCATGCCATGGTGCAGACGCTAGTCAGCTCTGTAAACGGAGCCGTGCCGCGACCATGCTGCGTCCCTACAGCTCTCAGCCCAATCGCTCTACTCTTTCTGGACCAGGAGGAACGTGTGGTGTTAAAAAACTACCAAGACATGGTGGTGGAGGGATGTGGCTGTCGA/-
Variant Notes
Deletion of the entire genomic sequences encoding the secreted form of the  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4494 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ggttcaagtccaattcacccatagtgcatgtcttttgactgtgggggaaaccggagaacctgaaggaaacccacgccaacacagggagaacatgccaattcacctatagtgcatgtgttttgactgtgggggaaaccagagcacctgcgggaaacccacgccaacacagggagaacatgcaaactccacacagaaatgccaactgtcccacccaggactcgaactagcgaccttcttgatgtgaggtaacagtgctaaccatgcgaactgtgccactgtgtcaccaATAACTTTTTACTTGTTGTCACCAAAACAcactcaagaactgtgttgtttcagctcattttaacgaAATATTGtgtgctactactactactaaactactactactactaaaagtGGCACCTCTTCTTTTACCTCTCTTTCCGCAGGTCCAACATGTTCCCTGCTAGCCTACTGGTTCTGATGATCCTGCTGCTACCTCAAGCCTCATCAGGTCA
CCAGGAGGGTCCCAGTCAGACTCATGGAAAGCTGGACAGCCTTCTGGAGCCTAGTTTGGCCCATACCATCCAGAACCTCCTGCTAACCCGCCTGGGCTTACAGTCGCACCCCAACCCCAGTACAGAGGCACAAGTTCCCCAGTATCTTCTGGACTTGTATCGATTCCACACTCAACAGTACCATCTCATCGAGGACCCAGAATTTAGTTACCCCTCAAAGCATGTGCAAGGAGCCAACACAGTCCGATGCTTTCACCACACAGGTACAGCATGAGCAGTTATTGCACAGTCAGGAGTGCCCAATCCTGGTTCCTGGAGATCTACCTTCCAGCAAAGTCCAGCTCTGATGCAACTTTGATCGAACCCACCTGTATTTAATTACCAAGTGCTCCTTCGGGTCCTACTTATTTTGTTTAGTTGTGTTTGATCAGGGTTGGAGCTGAACTCTGCAGAAAGGTAGATCTCCAGGAACAGGACTGGGTACCTAGGTCATGGAGAACACAGATTTCCCTTGGTAGTCAAACTAATTCAGGCCCAATCCCAATTCTACCACTTAGCCCTTCCACTTACATCTACCTCTCGTTTTGCGCATTCACGCCAAGCAGTAGGGGCGTCCCAATTCTCTTAAGCTTGAAGGCTTAGGGCTAAGGGGAACGGGTGAATAGCCCTTTGAAAGAAGATTTTTACGAAAATAGAATTGGGATTGGGCCTTAATTTACCACAAGCACAGCACAGAGATGTGAGGAGGTTATTTAACCTTCTGTAGGTGCCAGGATATGATACCTGTGCATTCAATATTTTCATATCACTTTATTTCGGTGGTCCTTATTGCACATTATGTTGACCAAGTTGTATTGCAACTACATGCCACCTAATTTTTATTAAAGTGTCAGTATGCTTAAAGCAGGGATGGGCAAACCTGGTCCTGTAGAGCCGGTGTCCTGCAGAGTTTAGCTTCAACCCTACTAAAGCACACCTGCCTGTAGCGATATTGAAGACACAAATTAGCTTGTTCAGGTGTGTTTGATTACTGCAGAGACACCGGCCCTTGAGGAAAGAGTTTGCCCATCCAGTATACTTTTAAATCTGTTGGCACTGCCCCACCAACAGACATTCTCCTGACTATAAGAAACATTGCAAGTACATGTTAACTTAAACTAATCCTAACATTGCAGTCTACCAATACTCTAATGAGAATTATTTGGCATCCCTGCTGGAAAATCCAGCTCAAACCAGCCTAGGCTGATTGCATGGTTTTAGCTGGTTGACCAGGCTGGTTTTAGAGGGGTTTTGGCCATTTCCAGGCTGGTTTCCAGCCATTTCCAGCCTGATCTTAGCTGGTCAGGATGGAAAATGACCAGCTAAATCCAGCTAAAACCAACTTGACCAGCCTGGTTTAAGCTGGACAAAGCTGGTTTTGGCTGGACTTCCAGCTTGGCTAGGCTGGTCAAGCTGGTTTTAGCTGGTCATCTCCCAGCCTGACCAGCTAAGACCAGGCTGAAATGGCTAGAAACCAGCCTGGAAGTGGCCAAAACCCCTCTAAAACCAGGTTGGTCGACCAGCTAAAACCAGCGAACCAGCCTAGGCTGGTTTAAGCTGGATTTTCCAGCAGCGATGTTGTTACATAGTAACTTAAAACCAACAAAATATGTTAAAGGGACCATCTAAATAAAGCGATACTAGTTTTTCAGATATCTTGAAGATATTGTTGGCACCTTGGAACAGGTTAAAAAGCAAATCAACTTATTTTCAAAGCTGCTCTAAGCAAATTATGTGCATTTATTGTTTAGTAGCACACTGATGCCTTTGCAAAATTGTGTTTCTTTCTTAGAGGTTTTGTCTTTTTTTTATTCCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTCTTAAACCAAGAAGCTTTTTCTTGTAAATTAAAGATGATTGTATGTTTTTCAGAAATAACGAGCCAAAATTAAGCGAGTTTTTCTTTCAAACAAGCAAAATGATCTGCCAGTGGGTTAGCAAAATAATCATATTCTAAACTAAACACAAGATTAGGTAACACTTTATTTTGATGGTCTATTTGAGTATTAGTAGACTGTCTGCTTAATATGTGTTAATACAGACATTTAACTGGTGTAATGTCAACTTACACCAGTGGTGTCCAAACTCAGTCCTGGAGGGCCGGTGTCCTGGAGAGTTTAGCTCCAACCCTAATCGAACACACATGAACCAGATAATCAAGCTCTTTGTAGATATACTAGAAACTTCCTGCAGGTGTTTTGAAGCAAGTTAGAGCTAAATTCAGCCGGACACCAGCCCTCCAGGACTGAGTTTGGACATGCCTGACTTGCACTAACCCTAACTCCAACCTAAGAGTCTACTGATAATCTAATGTAGGGCTGCTCAACCCTGTTCTTGGAGATCTACCTTCCTGCAAAGTTCAGGTCCAACCCTGGTCAACACACCTGAACCAATTAATTAGGACTTGAACAGCACTTGATAAATACAGGCAGGTGTGTTTGATAAGGGTTGCAACTGAAATCTGCAGGAAGGTCGATCTCCAGGAACAGGATTGAGCACACTGGATCTAATGAGAATTAGTTGGCAATTAGATGCAATGTAACTTAAATTCAACAAACGGACCATCAAAATAAAGAGAGACACAAGATTATTTTGTTTGTTTTAAGAAAAATCTCACTTAACTTTTCCTGAAAACAAGACAATATTTTAATTGTCTAGAAAATGCTTCTTGATTTAAGAATTTTTAGATTAGATGTACATTTACATTGAGTCATTTAGCAGACGCTTTTATCCAAAGCGACTTACAAATGAGGACAAGGAAGCAATTTACACAACTATAAGAGCTTTTTTATTTTTTGTAGAAGAGTTAGCGGTAGAACCAGAGAGGCAATTGCAGATTAGGAAGTGAAGTGGAGACTAAATAGTTGATTTTTTAGTCGTTTCTTGAAGACAGCGAGTGACTCTGCCGTTCTGATGCAGTTCGGGAGTTCATTCCACCAACTGGGCAGATTGAACGCGAGCGTTCGGGAAAGTGATTTCTTCCCTCTTTGAGATGGAACCTTGAGGCGAGGTTCATTCACAGAATGTAAGTTACTGGAGGGCGCATACATCTGCAGAAGTGAGAGCAGATAAGAGAAAACCAGAAGTCACTTTGTAAGCAAACATCGAATTTGATGCGAGCAGCAACTGGCAGCCAGTGCAAACGGATGAGCAGCGGAGTGACATGTGCTCTTTCAGCTTCATTAAAGACCACTCGTGCTGCTGCGTTCTGAAGCATCTGAAGAGGTTTGATAGAGTTAGCTGGGAGCCCGGCTAGTAGAGAGTTGCAATAGTCCAGTCTGGAGAGAACAAGAGCTTGAACAAGGAGTTGAGCTGCATGTTCAGATAGGAAGGGTCGGACCTTTCTAACTTAGACTAGAAAAAAGGCAAAAGCTCTAATTATAAAACACATTTTTTTGCAGTGAACATGATGAAATGCAAGCATTTTACAACTTAAGAGCTTTCTTTTTTCCATTCAGATTCTCCGACTCCGAGTCTTCCAGAAGAGCAGAAGACCACAGTGGACGGCATCCACATAGGCTTCAACCTGTCCTCCATTCCTTCAGAAGAAAGTGTGGTGTCCGCAGAGTTACGTCTACTCCATGAAGGGTCAAGTGGAGGTTCTCACGTGGCCAGTCTTTACCTTTCCAACCATGACCCTTCATCAAAACCCATTCTGCTCCATTCACGTCAACTGACCAGAGACAGGAAGAGTGCCCAACTCTGGGAAACCTTTCCCCTGGATAGAGAAGTGTTTCAGAATTTATCCAAGACGTCAGGAAGCCTGTCTTTTATCCTGGATGTTATTCCTGATAATAACAGCAGCAGTACTCTTCCTAAAGACAGACATTTGCGAGTACGCAGATCCACATTGCAGGACGGGCCTACTTGGGAAAGGCAAAGGCCTTTATTAGTGACCTACAGTCACGATGGCCGCAGCGAGCCTTTTGTGAATCTCAATAAGCGTAAAAGCAGCCGAAGCAGGAGCAGATGGACCAGGTTTAAGGGTGATAGGGGTCAGGGCTCTGACTGGAATGAAAGGCGAGTGAAACGAAACAACAGGAGGGCCGCAAAACTCAAAAGACTCTCCCGCGCTCGTTGTCGTCGGCACCCGCTGTACGTGGACTTCAAAGATGTCGGCTGGAATAAATGGATCATAGCTCCATCTGGTTACGATGCTTTCTTTTGCCTCGGAGAGTGCCGCTTCCCACTGGCTGACCATATGAATTCATCAAGCCATGCCATGGTGCAGACGCTAGTCAGCTCTGTAAACGGAGCCGTGCCGCGACCATGCTGCGTCCCTACAGCTCTCAGCCCAATCGCTCTACTCTTTCTGGACCAGGAGGAACGTGTGGTGTTAAAAAACTACCAAGACATGGTGGTGGAGGGATGTGGCTGTCGA/- TAGCCAGATACTTATGGAATAAACCAGAAATGGTGGACCTGAATTaggaagaaagaaactgaaagagATGAAGAAAGCGA  ...
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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