Genomic Feature

mz11

ID
ZDB-ALT-260113-3
Name
mz11
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with CRISPR
Lab of Origin
Ketting Lab
Current Source
European Zebrafish Resource Center (EZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Genome Browsers
Variants
Variant Type
Small Deletion
Variant Location
Chr 25: 25506740 - 25507051 (GRCz11) (1) Details
Nucleotide Change
ACAACGCACCCATTTATTCAGGGCATGCGCTCCGCGGGGATTGAACGCACCACAGCCCTAAGTTAGTGTTTCAAGTGCAGTGCTTTACCAAGAACAAAAAGTCATGTTAGAGGGACAGTGGATCCCAAAGCGTCCCTCCGGTGACTGTGTCCGCCTTGACATATATTTTAATATATGATGACGATATAATATTTAAGATAGTTAGGCCTTTATAAAGTGATAACTTATATTCAGCGATCATGTATGGATAAAATGTCTTAATATCCATTAAATAAAATTATTTACTCATCCTGAAATTACTATGGTCTCTCTCTCACATATACACGCATACATATATGGTATATATGGGCTAATATGAGCAAATATATCGATTTATACAAAAAAGTAAATAAGAAAATAATAAGATATTTAGAGATAACACTATGCAAGCATATATGTATATACATTTTTTAAATCAACTGATTAATAATATTGAC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
319 bp deleted in 5' UTR (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AATGTACATGTACACCGATCACACAACGCACCCATTTATTCAGGGCATGCGCTCCGCGGGGATTGAACGCACCACAGCCCTAAGTTAGTGTTTCAAGTGCAGTGCTTTACCAAGAACAAAAAGTCATGTTAGAGGGACAGTGGATCCCAAAGCGTCCCTCCGGTGACTGTGTCCGCCTTGATCCTTTAAGTAGTCTCCAGTGGGACATTCCCACGGCGCTGATGTCAGGTGCAGATCCAAAAGCTGGTTAGCCGCTGTCACACGCACAGTGGAGTGGAGAATAGGCGCAATGTGCGTTAGTCAGTGGCTTACCTGCTTTCAGAAATCACAAGTTCCGATGGCACAGGAAACGGTGGAAACCCAGAATATCGCTGTAAACATGTGAATAAAAATTATCATTTTTTATAACATGCCGTTCTGCAGCTGAACATTAGCAAAATATAATGTAGCCTACAAGGATAATTTATTGTAATATTTATAATACATTTTAATAATACGAT
ACAACGCACCCATTTATTCAGGGCATGCGCTCCGCGGGGATTGAACGCACCACAGCCCTAAGTTAGTGTTTCAAGTGCAGTGCTTTACCAAGAACAAAAAGTCATGTTAGAGGGACAGTGGATCCCAAAGCGTCCCTCCGGTGACTGTGTCCGCCTTGACATATATTTTAATATATGATGACGATATAATATTTAAGATAGTTAGGCCTTTATAAAGTGATAACTTATATTCAGCGATCATGTATGGATAAAATGTCTTAATATCCATTAAATAAAATTATTTACTCATCCTGAAATTACTATGGTCTCTCTCTCACATATACACGCATACATATATGGTATATATGGGCTAATATGAGCAAATATATCGATTTATACAAAAAAGTAAATAAGAAAATAATAAGATATTTAGAGATAACACTATGCAAGCATATATGTATATACATTTTTTAAATCAACTGATTAATAATATTGAC/- TGACAGTAAAAAAAGAAGCAAAGAAAAAACACACTCACCTAAACTTCTCAATCAATCCGTTAATTATAAGATGACCAAAT  ...
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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