Genomic Feature

gyf49

ID
ZDB-ALT-250529-1
Name
gyf49
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Development and functional regulation of BBB
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 11: 36355640 - 36355644 (GRCz11) (1) Details
Nucleotide change
tctgg/-
Variant Notes
5bp deletion, between 21bp to 25bp of the wild-type sypl2a coding sequence,  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 2 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TAATAAAATGTTTAATAACAAAAACATCAGTTTTTAATGTATTAATATTTTCCAACAAAACAATTATACATAATTCACTGCTAAAAACACAAACCTTTTCTTTTTGGCCCTATTTTGCGCATGTTTCTGCGAGGGTCTGGCAACACAGTGATACATTCGCTAGTGTGTGTGTCACTTTAAGCAAGGGAAAGTTGAAATCACGTGTTCCACTGTAGAAAGTTTGACAAGTTGGTCGATATAAGTCCTCCGTTTTCCCGCTATCGAAAACCTTGAATGTCATTCTCTCGTGTCCTTTTCTTCTATTAAAAACCAAAATAGGAAACTAAACCGGAATCGAAGTGTTTTGTATCAGCGACAGCGTAAAACCACCCAAACATGGAAGTCGTGCAGGTAATAAACTATCAGCAGTTTAGCAATCTTCGCGTTTTCCGCTCCACAACGTCGATGTGAGGATTTCATCTTTATTTTCTCCATTTACAGAAAGTCATGTCGGGATTTAG
tctgg/- ATTTGGGACCTGTGAAAGAGCCACTGGGATTTATCCGACTCCTGGAATGGGTGAGTTTTTACGATCAGTCAACAAGTCCATATTGTATACTTCAGCTGCAAAGTTAAATATGACAAAAAATACACTGCTACTTATAGTTTTAAACACTATATTAGATGATTATATCGACGTACACTACTATTACACAACTGCGTTGTAGTCACATATGGTGCTGTTTTGTCAATAGGGGCCAACACCCATGTCAATATAATGTCAACTAGACCAAAACTAGCATGTAATCCATTATGAAGGTCATTTATATAGATGTACTCTTTAAGTGTAATATCTGATTGGGTATGTGCAGTAAAAATCCTCTCAAGCATACAAATGCATGCAAATTTTTACATGTCCAGCCCTGCGCACTGTCCCTTGAGAATTAAATGATGTTTACATTGCCAACGGTAGGAGCAACCAAGATAGTCCTGTTTGTCACATGCACATTTAGAGACTCCTATGGTGGA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations