Genomic Feature

gz46

ID
ZDB-ALT-250328-1
Name
gz46
Synonyms
  • 1768 nt deletion (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Zhiyuan Gong Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 16: 29385397 - 29387205 (GRCz11) (1) Details
Nucleotide change
CCTTATGACAACACACCCCCATATGGACATTTTAGTATGTTTATTTATATAAGAATTTATAGGACTTTGATTAAACACTTTCAAAACCAATTTTGCTGTTATTTAAACCATTAAAATTTCAAAACGAACAAATATTTGTCAAGAAAATAAATAGACTGTTTTATTTTCTTTAACCATTTTATTTTGCTTCTGTCAAAATGTACATCATTAATATTAAAGCAGCATTTCTTAAACGGGTGAATCTAATGCACACTTGACAGTTCATATACCACTGTACTTTCCCACACACACACACACACACACTCTCTCTCTCTGCAGTGTATTAAATGGATGAATAACATTTAGAAAACATTTTCCTTCAAATGAAGTAACACATGAAAGTTTAATTCTTCATGCTCTCTACAAAAAACTCATTGCATGCCACAGTGAGAGCAGCCACCAGCACAACAAACTCCTGAAAGTCCACCTCTCCATCCCGGTTCTCATCCAGATCAGACATGATCTTCTCCACCACCATGGGGTCTTTACTTGCCTACAGCAGGACACAGATATTACTTCAAATGTGCAAAATGCAGATCAGACATTAAATGATAATTGTGGAGATTGAAACCTACGGCTAAAAAGTCACTGAGTTCCCCTTGAAGCAAGCTTTTAAGCTCAGATTTGCTTAGCTTGTACTTGTCTCCCTCTTTGGAGGAGTATGTGTGGAAGACTTTAATCAGGCCTTCCATTGCATTTTCCAGTTTTGAAACCATGTTAGAAAATATTATCTGCAAGATAAATAATTAAATACAAGTCAAATCAAACATCAACAGAATAAATTTTAAAAATAAATGCATGTACAATTTTTTTTAAAAACTAAAAATACATTTAAAATTAGTACAATTGTATTTAAAAAATTTGTCAAAAAGGTTTTGTTTTCTTTGTTTAAATACCAAGTTTAAAAATCCACTTTCTTTTCTGTGCAGGCATTAGTCAATTATATGCTCCATTTAAATGCATTTTTGTTCACTAAATGAAATAATGCACAAACATAATAACAATTTTCTAAGTGCGTATACCCTCTCTCAATTTCTACAAGCTTGTAGTAAGCTAATGCATGGACACCTGCTGACCCCAGGGGCCCCTTCATTACAGAGAGGGAAAGCGAGAGATCTAATATCTTTGAGCAGACTGGCCTTTTGGCATTGGCTGACTGATGACGATCAGGAGGGAGAGGGAAGACAGGTTTACATCAATTATTCAATTAGCCTTTTGTATGAACTAAAGGGTCTGATGCCGTTTATGCGCTGTTAAGGCATGTAGGCCTTAATTTTGACATTAGACTGCTATTGAAGCCAAGCTCTGGTATAGAATTTAAATTAAAGACACCGACATGATGTTGACGAGGATATTCAAATCTGAACCAACACTGCCGACTTAATAATAGAAATAACAGTATTAGGAACATTTAATTAAACTGCAGAAACCTCTATTGGTTGTAATATACTAGTATTATATGTTTTAAAAACAGCTTATTCGTATGAAATGGAGTAAGCTGCGTGAAGTTACACTTCTTCCATGAACTCTAATCACGTGCGTACACTATTGACATAGTTCTATCGAATTACTTTGATAGGGTTTTTCTTACAAAACCGGAGAACACATGGTAGTGCTTTAGAAAGCTGACATGAATAACATCTAAATCAAAAGGAAAGTGTTATTAACTTACCCACCAGACGAGGAGCGGTGACGACTGCTTGAAAAGATGTTACTAGAGCTCATTCATTAAATAGCGTCCATCACCTGTGTGGGGGAATTAGGCAAATA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1809 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ATTGCTTTTACAGTTATGAATTCAATAAACATTTAAAAACTTAGTAGTAGTCCATGTAAAGCAATGTTTTTTATTATTATTATTTTTTTAAATATTATAAATTATCCATGGCAACTTTAATGCATTACAGCTTTGGTATATTTACCTTTAACCCACAACCCTCAATCAAGTTTGGTGTTCGGCCTCATGAAAACGTTTAAGGACCTGAGTGTCTATACAACATTGTTATAAAGAAAGGCTAACTTCAACCTGTAGATGGCACTGTTACGACAAAATCAAATGAAATCCTCAATAGCAACAATACTTTTATAAAAAAAATTTTTTTTTTTTTTTTAATAAGCAATATCAAAATATGCATCAAGGAAAAAAAAAAAAAAAAAAAAAAAAAGTTAAATCACGCAAGTCCAGTCTAAATTACACACTCTGTCATGGAGACAGTATCTTTGTGAAAAATTTAAAAAATATATATTGATTAGGCCTAAACAGGTCACAAAGATGTA
CCTTATGACAACACACCCCCATATGGACATTTTAGTATGTTTATTTATATAAGAATTTATAGGACTTTGATTAAACACTTTCAAAACCAATTTTGCTGTTATTTAAACCATTAAAATTTCAAAACGAACAAATATTTGTCAAGAAAATAAATAGACTGTTTTATTTTCTTTAACCATTTTATTTTGCTTCTGTCAAAATGTACATCATTAATATTAAAGCAGCATTTCTTAAACGGGTGAATCTAATGCACACTTGACAGTTCATATACCACTGTACTTTCCCACACACACACACACACACACTCTCTCTCTCTGCAGTGTATTAAATGGATGAATAACATTTAGAAAACATTTTCCTTCAAATGAAGTAACACATGAAAGTTTAATTCTTCATGCTCTCTACAAAAAACTCATTGCATGCCACAGTGAGAGCAGCCACCAGCACAACAAACTCCTGAAAGTCCACCTCTCCATCCCGGTTCTCATCCAGATCAGACATGATCTTCTCCACCACCATGGGGTCTTTACTTGCCTACAGCAGGACACAGATATTACTTCAAATGTGCAAAATGCAGATCAGACATTAAATGATAATTGTGGAGATTGAAACCTACGGCTAAAAAGTCACTGAGTTCCCCTTGAAGCAAGCTTTTAAGCTCAGATTTGCTTAGCTTGTACTTGTCTCCCTCTTTGGAGGAGTATGTGTGGAAGACTTTAATCAGGCCTTCCATTGCATTTTCCAGTTTTGAAACCATGTTAGAAAATATTATCTGCAAGATAAATAATTAAATACAAGTCAAATCAAACATCAACAGAATAAATTTTAAAAATAAATGCATGTACAATTTTTTTTAAAAACTAAAAATACATTTAAAATTAGTACAATTGTATTTAAAAAATTTGTCAAAAAGGTTTTGTTTTCTTTGTTTAAATACCAAGTTTAAAAATCCACTTTCTTTTCTGTGCAGGCATTAGTCAATTATATGCTCCATTTAAATGCATTTTTGTTCACTAAATGAAATAATGCACAAACATAATAACAATTTTCTAAGTGCGTATACCCTCTCTCAATTTCTACAAGCTTGTAGTAAGCTAATGCATGGACACCTGCTGACCCCAGGGGCCCCTTCATTACAGAGAGGGAAAGCGAGAGATCTAATATCTTTGAGCAGACTGGCCTTTTGGCATTGGCTGACTGATGACGATCAGGAGGGAGAGGGAAGACAGGTTTACATCAATTATTCAATTAGCCTTTTGTATGAACTAAAGGGTCTGATGCCGTTTATGCGCTGTTAAGGCATGTAGGCCTTAATTTTGACATTAGACTGCTATTGAAGCCAAGCTCTGGTATAGAATTTAAATTAAAGACACCGACATGATGTTGACGAGGATATTCAAATCTGAACCAACACTGCCGACTTAATAATAGAAATAACAGTATTAGGAACATTTAATTAAACTGCAGAAACCTCTATTGGTTGTAATATACTAGTATTATATGTTTTAAAAACAGCTTATTCGTATGAAATGGAGTAAGCTGCGTGAAGTTACACTTCTTCCATGAACTCTAATCACGTGCGTACACTATTGACATAGTTCTATCGAATTACTTTGATAGGGTTTTTCTTACAAAACCGGAGAACACATGGTAGTGCTTTAGAAAGCTGACATGAATAACATCTAAATCAAAAGGAAAGTGTTATTAACTTACCCACCAGACGAGGAGCGGTGACGACTGCTTGAAAAGATGTTACTAGAGCTCATTCATTAAATAGCGTCCATCACCTGTGTGGGGGAATTAGGCAAATA/- GGCGGAGCCTACTCAAACTGCAACCATAACGTCTAATGACGTCATCAAGCAATTCCCACCCCCAATTTAAATATAACCTG  ...
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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