Genomic Feature
ihb871
- ID
- ZDB-ALT-250107-8
- Name
- ihb871
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Yonghua Sun Lab
- Current Source
- Other Pages
-
Notes
| Comment | Citation |
|---|---|
| 43bp deletion ，Between 45bp to 89bp of the wild-type nr1i2 coding sequence, ... | Zebrafish Nomenclature Committee |
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 9: 9537731 - 9537773 (GRCz11) (1) Details
- Nucleotide change
- CGCCTGTGTCATCACCAAGAGCAACAGAAGACAGTGCCAATCC/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 43 bp deleted in Exon 3 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TTGTTTTTGATAAAAAAAATGGATATTATAAATAATACTGATAATTATATTAACATTATACAAAAGCAAATTGTTATGAATGAACTGAATAGTAATAGTTTAATCCTTTATATTTATATCCTATATATATTCTTATTATATCGTATATATATATCCTTAATATTTTAAATTTTTCATATGTAAAGATATTTGCGTATTGCTTCACATCTTGTGTGTAGGCTATTAAACAGTGTGTAAGTGGGGCGCAACTCTTCCTCTTCCGTCTTCCTTTTTAGACCAGAACGCCTATGTCGCACATGAGCACAAATGCATTTGCTATTTAAACAACGTGGTGCAAAACAGCAAAACGACTCTTGCGTCAAGCTGAAACTAGCAAATAACATTTGCGCCACATTGCGCCGGGTGTATGATAGGGCCCCATGTGTTTATTTGTTTGTTTGTGTGTGTCTGGGCAGACGTGCGATGAAGCGACCGGCCCAGCTCTGCTGCCCATTTCAGAG
CGCCTGTGTCATCACCAAGAGCAACAGAAGACAGTGCCAATCC/- TGCCGGCTTCAGAAGTGCCTCTCAATAGGCATGAAGAGAGAGCGTGAGTTTAATTGAGCTTTACTTTTCATGTTCCTTACCCTGCCTTTGCTATTTAATTTTCAGAAACAACCTCAGATTAAAGCAGTAAGCCAAGAGTGTGTCATATCCTGTTAGAGAACGCTAATGCTACATTTGTGCTAGATAGGAGATCCAACATGCAATACTAATATAAAAGTGTTCATTTAATGGCTATTATTAGTTATGTATAAACCTGCAGATATAGCTTCAGTATTGGCCTAACCTCAGTAAATTAATTTAAATCCAGCAAACACACATGAAACATCCCCTCGATGTTCATTTTTGGTTCCCATTTGTTTGGTTTGGTTATTTTTTTAAGATCCAAGAAAAACTATGTGGAAAAATTAGGACACCCTATTGAAGCCTGGGTATTTTGTAAGGTTTTTTAATTAATTTAATCTTTATTTGAACGATACAGAAAGGTTAGGGTAATACAATTA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None