Genomic Feature
upv4
- ID
- ZDB-ALT-240828-8
- Name
- upv4
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Forlino Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 21: 577619 - 577625 (GRCz11) (1) Details
- Nucleotide change
- TCCTTCA/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 7 bp deleted in Exon 7 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
ATAAACTACTTTTAAAAATGCACCTAATCAGACTACAGTTACTTTTAGTTCCTTTTTTAGTTACAGTTACTTTTTATGGATTACATATTTACACAATGACAGTAAAATATTGACTATTCATTGATTCTGCTAACTTTAAATGTTTTTATTTGTTTATAATAAGCCTGCCGCATATATGCACAATATCTAACAGATTATATTAATGACTACAAGTTTTGTTATTTAATTAATAATCTGTAATCCAATTAAATTAGTAAGCACATAAGTAATCCAAATGTAATCTAAAAGTACTCAGACTACTTTAGCATAAATGTGTAATCTAACAGGTGATATCACTGACTTCTGTGTCATTTGTAACAGTAACAGATTGCAGTTGATAATTAATCCCCTGGCGGCGTTTACCTTTAGCCCAGCCGACCGCCACCATGACGAACAGAGCGTCGCTGTATTTGCTGCCCGCTTGCGAGACGCCGCTCAGAACCTTCCAGGTTCTCGTCACT
TCCTTCA/- TGGCTGTCAGGACCAGTCGCAGCGGCAGGAGAGATGCCAGAGAATACACCACATCCAGCGGACAGTAAAACACCAGATACCTGCGCGCGCACACACATAAATGAGCCTGTGTGTCTCAGGTTATGTATATAGTTACGCATGTATAGTATATGTATAGTCAGTAGCTTGGATTGTTAGTGTACTGCTGCAGTATGTGAAGGTTTAATATAGCTCTAGTGTTGTGTATTATATTTATTTATGCAGCTCCGTGGGCCTCCGTGACACAACATTATGTTCAACTAAGTCCACACATGTAGAGGAATGACAATAAAGCTTGACTTGTACGTGTGTATGTACATATACACACACACACACACACACACCCCCACACACACACACACACACACACACACACATACATGCACAAGTACACATGCACACAAAAACATGCACACATATTTACACACACAATCACACTTACGTGCACACACACACACACACACACACACACACACACACAC - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| tmem38bupv4/upv4 (AB) | Homozygous | ♀+/- ♂+/- | 4 figures  from Tonelli et al., 2023 | 3 figures from Tonelli et al., 2023 |
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Supplemental Information
- Genotyping protocol
- None