Genomic Feature

au93

ID
ZDB-ALT-240808-1
Name
au93
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Eberhart Lab
Current Source
Other Pages
Notes
Comment Citation
Loss of raptor leads to premature death beginning at 6 dpf, with no mutants  ... Tucker et al., 2024
Genome Browser
Genome Build: GRCz11Chromosome: 6
Variants
Variant Type
Small Deletion
Variant Location
Chr 6: 17924842 - 17924845 (GRCz11) (1) Details
Nucleotide change
AGCT/-
Variant Notes
The mutation results in a predicted premature stop codon after residue 237, out  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
GAAGATATTTTAATATGACCAGCACCTGTGCATGTATATGTGTATAAACACTTCTTTTGAACTGTTTAACTGCACTTGTAAGTGAATCTTAAGTTATTTTGTGGGATAGCTAAACATTTTCTCAATAAATTAAAAACAGAAAATGTTTAAACTTGTTTTGTCCACCTCCTCTCCCCCCAGTCACCCCTCATCCGGATGGCCCACTATGCAGCTCATTATTTAATCCTTTGTCTTTGTCACATTAGTAATGATAGTTCACACCTCATCACACAGAGCCATAGATATTTTTTTCTGAGTCTTAAAATTTAGATCAAAATATTGTTTTCCACATTATAAATACAATTTAACATTTCTTACCAGCGTAGAGCAATTTTGATTGGTGTGGTGAGACAAGAAGTGAAGAGGTCAGCAGGGAGGTCAGGATTCATGGGTAGGAGTTCACTGGCATCACAGGCAGCCAGCTGAATGCAGTTTTTCATCGAGGGAGGCAGAGGCATCTG
AGCT/- AGTGGGTGGTTTGGGTTTATTGCTGCCACCTATTATAAGAAAAAGGAAACAAGTAAACAGAATTAAATCATATATGTCAAAAAGATGAAATTATTTTGCTCTGATGTCAACACAACACACTAAACATTTCCCGGGATTTATATCTTGTTTCTTTTACCTGTTGCTGCTGTTGATGTTACTGTTGCTACTGTTGCTGTAAATGCTGTTACTGCTTTGTTAATTTTCTGATGTGCTCTGTTAATTTTATTAACAGTCATTCTGATTTAATCTGTCCAATGTAACTGTTTATTATATACTTACTATTACTATTTATTTTTTATTCTATAAAAAGTAAACTGATCAAAATTCATTAATCAAACAAATTACTATCGCTGTAATTGAGGCCAGCCATGGCCTTATGGTAAGAGAGATGAACCTGAGATCCAAAGAACACAGGTTCAAGTCCCGGCACCGGCATGATTGTAGGTGGGTAAAACACTCTCTTCACCCTTTAATACCAC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
rptorau93/au93 (AB)Homozygous♀+/- ♂+/-8 figures with image from Tucker et al., 2024Fig. 2 with image from Tucker et al., 2024
rptorau93/au93; y1Tg (AB)Complex2 figures with image from Tucker et al., 2024
rptorau93/au93; zf155Tg (AB)ComplexFig. 8 with image from Tucker et al., 2024
atg7sa14768/sa14768; rptorau93/au93 (AB)ComplexFig. 11 with image from Tucker et al., 2024
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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