Genomic Feature

sq50

ID
ZDB-ALT-240315-13
Name
sq50
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Carney Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 15: 39354632 - 39354644 (GRCz11) (1) Details
Nucleotide change
CAGTGTCCAGCTG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
13 bp deleted in Exon 11 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TAGTTTGGAATTTAAGTTTTTCACTGCACTTCTAAAATGCAGTGAACTAAAATAAAAAAAAAAATGTATGGATTCTAAGCAATGACAGGTAAATGAAAAAAAAAAAAAAACTACCCGTAGTGTCTCGAATCTCTCGATTTAAAGTGACAGTTCCTCTAAAACATGAAAATTTATTTCCTATTTACTCACTGTCAAGTGGCTCCAGAGTTTTTATTTTCTGTTATTTTGAAGAAAGCTGAAAACCTGTAACTATTGACTTCAATAGTAGAAAAAAACAAATACAATGGAAGTCAATGGTTACAGTTTTTCAACATTTTTTAAAACATCTTTTATTGTGTTCAACAGGATAAAAAAAAAACACTCAAACCGGTTTGAAACAAATAAAAGTTGAATAAATAAAGAATAAAAAAATGAATTTTCATTTTTGGGTGACCCTTTAAATCATAGTGAGGAGTCAGTGAGGAATCTCTGTACCTTTGCGTATCGAATCTGCAGGGCTC
CAGTGTCCAGCTG/- CTTGAGTCGGGAATCATGTGTGGACACCAGAACTCCATCTTTCCTCCATAAGATGGTAGGAATCGGTGTCCCGGTGGCTTGGCAGCTCAGAACCACCGTCCCGTCCACTGCCACAGTCTGGTTGGTTGGACCCTGACGGACGATTGGTGGAGGCCTGTCTGAAATCACTGAGAAAGACACACAACATCAGAAACCAAGACTATTACACTAGTTTTAAGTCTGTGTGAAATCAAAATTGACTGTTTGTTTTGCTAGCGCACATTGTTATTCACATTAATCTGTGCAAATTGAATTTGGTAATCTTCCATTAAAGTTTGACCATTTGCTTCCGCATGCAGAGTGGCAGACTTTCTCTAAAGACATCAAAAAGAAAGCCCCGCCCCCTACTTAATATTCAGTTTCAGTTGGAAGTAAATCGACATAATGAAGTTAAAGTCTCAGCAACTTCTGGTTAATGTGGACATTAAGAATGTAATTATAGTGTATTAAAAACATTATGG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations