Genomic Feature

hv1

ID
ZDB-ALT-240305-1
Name
hv1
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Jain Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 15: 8771850 - 8771855 (GRCz11) (1) Details
Nucleotide change
GCCAAG/-
Variant Notes
Deletion of 6 nucleotides at Ch15:8771850-8771855 (GCCAAG), producing in-frame  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
6 bp deleted (1)
Transcript Consequence
None
Protein Consequence
Amino Acid Deletion: at position 17 (1)
Sequences
Flanking Sequence
TGACAGACAGTATAGGACTTCATGTTTTGTTAAAGTTCAGTGATCCTTTAAAACAATGTCTCAGTTTATCTTCCAACCCCAACTGCACAAACATCAACACGCCATGTCATTGCCTTTACCTCCTTGTTCGCCAGGCACGCAATTCTCCTCAAATGGAAACTTATGTCCCCTCCATCATCAGAACACTGGATTAAAGAGGTTCTACATTGCATCTTTGCTGAGAAACATAAGCCATTATTTAATAGACTGTGAACGATGTTGTACTTTGATAGCCATTGGCTGCTAATATGGTTCGCTTATTTAGAATTTGCAAAGAATACTTTACTGAAATTATATTATCAAGGAAAAACTTTGAATATTTGCCAATATAAAACCAACTTTACCCCAATAAGGTTTATGTTTTATGCTTTACTGACTGATTTACAAAATTTTTATTATTTTACTGTTTATTTCCAGATCCGCTTTATCCTCATCCAGAATCGGGCTGGGAAGACCAGACT
GCCAAG/- GTGGTACATGCAGTTTGATGACGATGAGAAGCAGAAGCTAATTGAAGAGGTGCATGCTGTAGTGACAGTCCGTGATGCCAAACACACCAACTTTGTTGAGGTACAACACTCGCTTTTAACATTTTTCTCAGGTCTTGGGTTAAAGTTAGTTTTATATTCACATAACATTGACAATTTGTGACACCCTTCCCCAAAACCGCTTGCAAAGTATGACTTCAAAGCATCATTATCTCTATTTAATTAACTGTGAACAATAATATACTTTGATCAGGGTTCATACGGTCATGGAAAACCTGGAAAAGTGATGGAATTTTGACATGACATTTTCAAGTCCTGGAAAAGTTTTGAAAAAATGGAAAAACCCACAAGGTTTTGGAAATGTCATGAAAATGTGTTTACCAATTACCTGTATACCTGCACGATATTGGAAAAATCTGACATTACCATATTTTGTATTTCTGTGATGTACATTGCGATGTGAATACAATTTCACTTGATGA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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