Genomic Feature

cri1

ID
ZDB-ALT-231127-1
Name
cri1
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Falk lab
Current Source
Other Pages
Notes
Comment Citation
The first nucleotide deleted "A" is the SNP rs179714175. Haroon et al., 2023
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 33282322 - 33282354 (GRCz11) (1) Details
Nucleotide change
AGCCAATCCCACTGCCTGTAGAGTGAGTCTCTG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
33 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AATAGCCTTGCTGAGGATTAATAATTATCTTACTGTCTCCAAACAATTGAATGGAAGGTGCTAGATGTAGAAGTAAAATGTCTTTCTTTCAGGCACTGAGAAGATTTCCCATAGTCTGGTGTGATTATTATTATTATTACTTGAAAATTGTGTTTCATTTTAGATAACCTGGCCAGGTTTAGTCAACAATCAACTTCCACTGTCGAAGGAACAAAGAAAGGAGAAGACACCTTTCTGAAGTGGTTTCTCTTGTTGATACCCGTCACCACCTTTTGTCTTGGAACATGGCAGGTACAGACACACACAAGTGTAGTGTTTATCTTATAAACCCATAACTAAAGAAGCAATGGGGTACATGCAGTTTATTTTATCTCAGGATTTTCAATGGTGTGCACATAGTCCTTTAGCAGTTTCTGAAAAGCCCTATTTGACATTATAGGTGAAACGTAGAAAGTGGAAGTTGGAGCTGATCAGTGAACTTCAGAGTCTGACGACTTCAG
AGCCAATCCCACTGCCTGTAGAGTGAGTCTCTG/- TGCCTTCCGTTCCTCCATGTGGAGGTAATACACAAACTTATAATGATTTGATGTTATAATGAAGTAACAATGTTATGTATGTGTGAGGCAGTACTATGGAAATCAAGCAGCTGGAGTACAGGCGTGTGAAGGTCCGTGGACATTTTGATCACTCTAAGGAGCTGTATATTTTGCCCCGTTCCCCTGTGGACCCTGAGAGAGAGGCTCGAGAGGCAGGGAGGATATCCTCCAGTGGTGAAAGTGGAGCAAATGTTATTACACCCTTTTTCTGCACTGATCTGGGGTACAAACACACACTATTAGAATTTTACTTGGATTATGCATATACTTGATTTGCAACTCACTGCAGCACATTTTTAGGATCACTATCTTGGTGAACAGAGGTTATGTACCCAAAAACAAGATCAAACCAGAAACCAGGACGAAAGGACAGGTAATATAGTGCTTTTCTTAATTTATTTTTAGATCAAATCTAGGCGTAAATATTGCCAATTAATTTT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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