Genomic Feature
ig5
- ID
- ZDB-ALT-230516-1
- Name
- ig5
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Vermot Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 2: 55665319 - 55665346 (GRCz11) (1) Details
- Nucleotide change
- GGACATGGCTTTACCTTGCCTTTTGCCT/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 28 bp deleted in Exon 1 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TATTGTGTAGTCATTGGAAAGCGCGTATATTTGGAGACTAAATTACGCACGGGTGAATGTAGGCTGTCGGGCGCTGGAATTACACTTGGATCAATTCGAGCTTTTCTTTGAAACGCCTTGGTAACAGTTTTGTGTGTGTTTCTACTACAGAGATGATAGTGACACGCCTCCTGTCAGCCGCGCCTCCGCGAGGGAGGTGTGCGCGCGCATCAGCGGCTCTGGTTTAAAAGCGGCGGAGCGTGCACTGTCCCGCACTGAGAAACGAGAAGCGCTGGAGAGAGCGCACTGTGCCTTATATATAGACTATCTTTGGGAACTCTGAACGCGGTTTCCACCGCGCACACAATTGGTCTAGGAGCCGTATTTATTAAGTAGGAGGCGCTCCTGCCGGGCAAACTTTGTTCATGACTGTGGAAGTTCACTCGAGGAAAAAGCGCGCAGAAGTTTGACATCTCTTCAGGAGCAAGTGCATTAATACTGAATACACACCGAGCACGCGT
GGACATGGCTTTACCTTGCCTTTTGCCT/- TCGATTTCAACGTTTGCAAACCAGAAGGAGAAGCTCTGGGAGGATGTAAGTATTTGACACTTTTATGCACTTTTAAACGAGGGTGAAGTCAGGGCAATGCGGGAAACCTCACCTCAGATGTGGTTAAAATTGGGTTAACACTCGAAAAACACTTGCATTTCCTACTTGTTTTTGCGCAAAATACAATATATTGGAGATATAAGTCAAAAACACGCTTAAGAAATTTAGTTTTTATACGTATTTTATGCTTATAAGGTAAATATATCTTGTTTAAATGCATGTTTGATAAAAATGTTTAGTGCAAAACTTAATCGGAAAAGTGGGGGAAAGTAATGTTATAGTTTTTACTGTGTGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTATTTATAAAAACACACTAAATTATAATACACTATAGTAGGTTACTAA - Additional Sequence
- None
Fish
No data available
Supplemental Information
- Genotyping protocol
- None
- Chow, R.W., Fukui, H., Chan, W.X., Tan, K.S.J., Roth, S., Duchemin, A.L., Messaddeq, N., Nakajima, H., Liu, F., Faggianelli-Conrozier, N., Klymchenko, A.S., Choon Hwai, Y., Mochizuki, N., Vermot, J. (2022) Cardiac forces regulate zebrafish heart valve delamination by modulating Nfat signaling. PLoS Biology. 20:e3001505
- Vignes, H., Vagena-Pantoula, C., Prakash, M., Fukui, H., Norden, C., Mochizuki, N., Jug, F., Vermot, J. (2022) Extracellular mechanical forces drive endocardial cell volume decrease during zebrafish cardiac valve morphogenesis. Developmental Cell. 57(5):598-609.e5
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