Genomic Feature

zf3358

ID
ZDB-ALT-220119-16
Name
zf3358
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 16: 9621536 - 9621541 (GRCz11) (1) Details
Nucleotide change
CCTATG/-
Variant Notes
Abnormal
splicing caused the loss of the catalytically important threonine  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
6 bp deleted in Exon 7 (1)
Transcript Consequence
Splicing Variant, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
GTTAAGAAATGCATAGAACTATTTCAGCTGTGTGCTTAATAACTGCACACTTATTTATTAATTCAATTGGACACAATATTCATCATCCAATTAGAATTGAGCATTAAACAGCCCCATCATGAACTGATAAGAACAATGACAGGAACACTTGAACTGGCTTCCATAGAGACCAAAGATGATTATTTCTAGTAGTGCAGGATTGCCCGATAATAAAAAGATGATAAAAGATAAACTCATGGAAGTGCTGAAAGAAACCAAGTATACTTTAGAATAGTTTTTTTAAAAAGTGTTTAGGTGTGTGCTTAGTGCTAAGGAAGGTCATACTGATGAAGAAGCTGTTTTATTTGGAAAACAATTTAGTTTGTATCTGCATATACTCAATACATTTTGTTTATATGTTATATATTGTGTTGTATTAACAGCAGGTTCACTAGTAAATTAATGACTAAATATTACTTTATTTTGTAGGATCCTGTGGAACACATGCACCATACATGAGG
CCTATG/- TATCCTACAAAAACCTACCCAAATTTGTATACAATTACAACGGTATGTATTAATTGCAGATTTTCAGAATCTGCAAGATTACATTTAGATTTTACAATTGGAATATAAATTTACAATGATCAACTTTTTATTATGATGGTATTTCTGTTCAATTGATTTACTTTTTCTTTTGTTTTTTTCTTTGCTTTAGGGGCTTTATCCTGAATCGCATGGGATTGTGGGTAACTCCATTCATGATCCAAGCTTTGATGCCAACTTTAACTTCCGTGGGAAAGAGAAGCTTAATCATCGATGGTGGGGAGGCCAGCCTGTAAGTTGCCCTATAATTTTCATTAAAGGTGCCATAGAGTGCACTGATACAGTATGTTAAATTGTTCTCTGATATCTACATAAAAGGTATGTGGTATAGGTATGTGCAACATTTCTCCAGAAAAATTTTACAAGCCATTTACAAACTAAGGATTTGTCCCTAGACTAAAATAGTCTTTTTGCCTTGTTTG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations