Genomic Feature

fci500

ID
ZDB-ALT-210513-1
Name
fci500
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Tooze lab/Molecular Cell Biology of Autophagy
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 7
Variants
Variant Type
Small Deletion
Variant Location
Chr 7: 38806396 - 38806400 (GRCz11) (1) Details
Nucleotide change
CCGGG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 3 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ATTTTAAAGACTTTAAGAACTACTTTAAAAAGTGGACAGAAATCTCTTAGATTTGAGTAAAATATCTTTATTTGAGCTTTGTTTAGGGTTTGCATTGATATGAGTGTGAATTAAATTCTAAATTATGACTTAAAATTATGATTTTCATTCTGGTGTGAAAAAAATCCTTAAAGCATTTAAACATCAATATTTTGCTTTTGATTTTTCATTGTTTTAAAGCAAAACAAGACCTCTGAGGTTTTGAGGGAGATCTCCACACACATAGATCGCCCGATGCCAGGCAGTTGTCCAGCAAGAGCTTTTTTTGCTTCATGAGTGACCTCGGGGATGTCCTTTATTGCCAAATTAAACTGATAGAGAACAGAAAAACACAGGAGAGCTCATGTTAATTATGGAGTAAAGACAAAAATTGTCCATTTGTAAGGAGCATCCTTGAAATTTCTTACCCAGTCCGAACCTGTCGGTGATGAAGACGAGCAAGTGCTGATCTTCTCTCCAAG
CCGGG/- CTTGCACTATAACCTGCACTGTCTGAAAGACACAGGTAAAACAAAGGACATCATGACATGATTAACTACGATATCAGACTGCTGTAACGTATCTTTGCATTTTAGTTTGTAATGCAATCACCTTCAAAGCAAAGAATTTGATGAATTTATCTAAGTCTTTCTTGTCCTGTGGGCTCAGATCACTATCCATTGTCGCACGAGCCTAAAACAAATAAAAGACAATTTCCTTAGTAAAGTAGGAAATGAGATACAGCAAACAATTAGCAAGACAGTAGCTGAATAGACATATTTAAAAAAGAGAGCCATTCAGAACATTTACTAGTGGAAGATGCTCCTTAAGAACAATTTACATTTACACAAAATTTAATGAAGCAAAACCTTTTCCCTATTTCTTGCTACCCTTCTTAGTACTTTTATAACATTAGCCTAAATATCTTTATATTATCTACTCTTACCTACACGTTGACAATTTAATAGAATATTTGAATAACTGATGACAG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
atg13fci500/fci500Homozygous♀+/- ♂+/-5 figures with image from Moss et al., 2021
atg13fci500/+Heterozygous♀+/- ♂+/-Fig. 1 with image from Moss et al., 2021
atg13fci500/fci500; hu5910TgComplex2 figures with image from Moss et al., 2021
atg13fci500/fci500; zf155TgComplex
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Supplemental Information
Genotyping protocol
None
Citations