Genomic Feature
upv1
- ID
- ZDB-ALT-210401-8
- Name
- upv1
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Forlino Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 19: 42609330 - 42609333 (GRCz11) (1) Details
- Nucleotide change
- TTTC/AG
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 2 bp inserted / 4 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
AAATGATGAATTAAAAATTTTGGGTGAACTATCCCTTTAAGCTTTGGTTATTTAACTTTTACAACCAGCCACAACAACAACAGAAATGTCCACTACAGTACAACTCTTGTAATCTGCTAAATATCGTCCACAGCAGTGAGTTAACTAATGAATAAACAGAATTTAATGGTAAATCACGGCAGTGTTGTTTTAGCTGTATGGGGGAAGGGAGCGCACTGTGGGAAACTTTGGGGACGTGGAGAGTCTTGCGGGCGGGTCTTGTTCTCTCCAACTCCTGCTACTTTTTTGGGGGGGTTGCATCTCCATAAGCCACCATGGCTTCCTCATTCCATTGCATCCGAATTGCATTATTAATAATCTCCTTTTCCGTTTGCGTCCTCGCGCAGTATGAGAAATATAACTTTCGCAGTTTCCCACGACACGAGCTGATGCCGCTGGACTCCGCGTACCGACATGCGTTAGACCTGTACAGTGAGGAGAAGTGGAAGGAGAGCGTGGAG
TTTC/AG TGGAGGTCAGTCTGCGGCTCTACCGGCTGCTCCGGGACAGCGAGGCCTTCTGTAACCTCAACTGCAGCTCGGTCAGACTCGACGATGAGACCCGTTTCAGCGACTTTCCCGAGCTGCAGGCCTTCGGTAATGTGATGAAGAGAGCTCAGTGTTTGAAGAGGTGCAAACAGGGGCTACCAGCCTTCAGACAGACCCTCCCCAGCCGGGACACCGTCGATGAGTTTGATAAACGGGAGCCATACAAGTACCTGCAGTTCGCCTACTTCAAAGTGAGTAACGTAACGTTGCTGCTTTACTCACGTTTATTTAGTATACGTTTATTCATAATCAGGTAGCCTATTAATGTTAAGTTAAGTTAAGTTAATGTAAAGTTAACCATACATAATTTATGTATGGAATGATATGTATGGATCATGTTTCACACTTTACCTTAATGTTTCATAAATTAATGTATTTACTAACATGAACAAATTATGAATAATGTACAGCATTTATTAGTA - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| crtapupv1/upv1 | Homozygous | ♀+/- ♂+/- | 5 figures from Tonelli et al., 2020 | ||
| crtapupv1/+ | Heterozygous | ♀+/- ♂+/- | Fig. 3 from Tonelli et al., 2020 |
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Supplemental Information
- Genotyping protocol
- None