Genomic Feature

sd60

ID
ZDB-ALT-210225-5
Name
sd60
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Yelon Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 5
Variants
Variant Type
Small Deletion
Variant Location
Chr 5: 23143405 - 23143424 (GRCz11) (1) Details
Nucleotide change
ATAAGGAGAGGAAGAAGGGCC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
21 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AATATCACGTTTAACAACTATAGTAAGATGAATTTCAGCTATAGATTCTTGATGAAATGTCCGATGTGCGCTGTTCTCGCCTGGGGTTTTGTGCTTAAAGCACCTGATGACTGCCTGGAGCTCAGATGGACGCATATCCTGCAGCGTATGCCTGAGAATGTGCGTTTTCATGGGTGTAGTGTGGATGCAGAGCATTTCAAAAACGCTAAGATGAAACGCCAGTGTGGACGTGTATTGTTTTCATTCTAAAGCGCCGTTTTAAAACTGAAACGTATTAGTGTAAATGGGGCCAGAGTGAGCTTATGCACATTGGAGTTTGTGCTTGTGTTTTTTTTACTGTAACACTTGCGTATGTGGGTTCTCTGTGAAGTGTGCAGAGAAGTCTAAATGCATCTATTGTCGTTTATTTCTGTTGAATGTTACTTAAAAAAAAATGCATGTTCGTTTTTTCAGAGTGACATCCATTGCGGACCGGCTGAACGTAGACTTTGCTCTGATCC
ATAAGGAGAGGAAGAAGGGCC/- AATGAGGTGGATCGAATGGTGCTGGTCGGGGACGTGAAGGACAGAGTGGCGATTTTAGTAGATGACATGGCAGACACGTGTGGGACAGTGTGTCATGCGGCTGACAAGTGAGGACATGCATGATATGCAGTCACTTTCATGCTCAACACAGATGCATATTCAGGATTATCCTGCTAATCAGTCATGCTTTCATACAGCGTTTAAACTGCATGTGTGTGTCTCTCTGTCTTCTCTCAGACTAGTGTCTGCTGGAGCCATTAAAGTCTACGCCATCTTGACTCATGGCATCTTCTCTGGCCCAGCCATTTCTCGCATCAACAATGCCAACTTCGAGGCTGTTGTGGTCACCAACACAATTCCACAGGAGGACAAAATCAAACACTGCAGCAAGATTCAGGCACAGGAATTTATCACTTTAAAAATCATGATTTAGGGCTGGGTCATGAATTCTAGATAATAACAATCAAATTTAGAGATCGCTTTTTCACGTTCTTTAATAT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
prps1asd60/sd60Homozygous♀+/- ♂+/-Fig. 4 with image from Begovich et al., 20202 figures with image from Begovich et al., 2020
1 - 1 of 1
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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