Genomic Feature
ug105a
- ID
- ZDB-ALT-201202-1
- Name
- ug105a
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Marcos Gonzalez-Gaitán Laboratory
- Current Source
- European Zebrafish Resource Center (EZRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 10: 5234378 - 5234387 (GRCz11) (1) Details
- Nucleotide change
- CAGTGGGTGT/-
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 10 bp deleted in Exon 2 (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation: 20 AA missing (1)
- Flanking Sequence
-
AGGAACTGGTTTTTCACGCGTTCCCCCCTGGTGGGTTGTGGAGTCCATTGGCCCTGTCTTCAGCTCATGTTTTGAATTGTCAAAGATATCAGAATATTTGCAATATTTCAATTCTTACAATATCTAAAGTGGTTGTTACATTTCAAGACAACACAAAACAACAGCAACAACGGCAACACACACACACACACACACACACACACACACACACACAATACTGCATTTCCCCCATAACATTCTCCAGCAGCCTATATTAAATGTTCAGCTTACCAAACGGTATGCAACAGTACAAGAAATGTAACAAATGGTTTCTTTATAACCATAACGTAATGCTGGTTTGATGGTGACCAAGCAAATGACATCACATTCAAAAACAGAGGTGGAAAATCCGACTGACGAAGCCTGCAATGACGCTTCTCCTCCACGCGATGGCGCCTCTTTATCAATCAGGAAGTCGCGCAGAGCGATCATGTGACTCAGTCAAAATGGCGTCGGGGCAA
CAGTGGGTGT/- TGGTGGAGATGGTGCAAGCTTTTTACGAGGTAACTACAAACTTTCTTCTTTTGTCTTTTTGAGGTTTTTAAGATTTGTAAATATCGACAGACTGTTCTGCGTTTGCTGAGGTAAACAGGACTGGCGTAGGTGGTTGTATTCGGCTGTATTTCACATGTAATCTTCAGTAGTCTCATAGTGTAACTCCAGGAAGTGTTAAATATGACATGAGTATCAGTCAGACAGGTGAGTTGCACACCTAATTCTACCTTTACTAGTAGCTATAGTGCTGTACCAATGGTGGTGGATTTACACAAATATAGGTTCTGCTAAAAATTGAATTATGTCATTGTATAACAAGAACACTGTTTATTTTGTTTTTATCTGTTGCCAAATTGTGTAGTAAGTTGAGGTAAAGTAGGTTTGGTATTCGCAAATTCGTTCTTTTAATGGCCCATATATTGTTTATCGCGCTAAGTTGAATATTGAGTCTGAAATAGCACGCAAGGATGACTTCAAAA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None