Genomic Feature
pt544
- ID
- ZDB-ALT-201015-11
- Name
- pt544
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Beth Roman Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 10: 566293 - 566310 (GRCz11) (1) Details
- Nucleotide change
- GACTGCAGAATAGCGGAG/-
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 18 bp deleted in Exon 2 (1)
- Transcript Consequence
- Inframe Deletion (1)
- Protein Consequence
- Amino Acid Deletion: 6 AA missing from position 303 to 308 (1)
- Flanking Sequence
-
CCGCAGACGCCTGGACGGTCCGCATATTCGACACACAGCGATCAGACACACGCTACAGAGAGCCGCTGGCCTCAAAACACATCCATCGCAAGGACATCAGCTGGGAAGTGTTTGACATGACCAACGCCATCCGAAACTGGAGAAAAGTCGGCATCGAGACCCCAAACCTGGAGGTGTGTATCCAAAAGGCGTTCAGGAATACGAATGACTGGAGATATGTCGGCCTGGACATTGATAGAGATCCTGATGGAAAACACGAACCTGTAATGATCGTATTCTCCAATGATCAGACTGAAGATCAGATCGGGGATGGAAATAAGGATCAGAAAGAGACGCAGATGCACTCGAATATTATACATGAGGACGGTGGTGAAGATCCTCAGATGATCAGTGATGAGAGACAGTGGACGGATGGAAATAAGGATCAGAAAGAGACACAGATGCAATCGAATATTATTTACGAGGACGGTGCGAGAGTTCGGCGCAGCGCTAAAGTGGAG
GACTGCAGAATAGCGGAG/- ATGTACGTGGATTTTAAGGATATCGGCTGGGATTCGTTCATCTTGGCTCCGTCTGGATATCAGGCGTTCACTTGTCGCGGCGTCTGCAGCTATCCTCTGACTCAAAAAGTGACGCCGACTAAACACGCCATCGTCCAGACGCTGCTCAATCTGAAGAGTCCCCAACGGGCCGCTCAAACCTGCTGCGTTCCCACTGAGCTGAAGCCCATCTCACTGCTGTACGAGAACGAGAACGGCGTCGTGGTTTTAGATAACAAATACGGAGGCATGGTGGTGAAGGAATGTGGATGCAGATAGAGGAACTGATCAAACAAATGAAGAAATCTCTGAAAGAGACATGCAAATAAAGTGAAGTGAATCATTTTTAATTCAATTCAATTCAGTTAGCAAACAACAGAACAGATCCTAAATGTGAATTAGGTTTCCATTATTGTTACGCTGGGTTCAGAGCACTGTCACTTGCTCTAGTTTACTCACAGGATGTTTTTCCCTTCATGCAA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None