Genomic Feature

hza54

ID
ZDB-ALT-200810-1
Name
hza54
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Jie Mei Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 11
Variants
Variant Type
Small Deletion
Variant Location
Chr 11: 878762 - 878766 (GRCz11) (1) Details
Nucleotide change
CAACA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TCCCCACAGACACCAGCACTAAATATAGAAACCACACAGAGTCTTTGGTTTTACAAAATCTGAGGTTTTTACATCATTGCGCTCTGTCAAACTCTTCTTTTCTTTCTTTACTCCTCTCGACAACCTGTATGTATTAATATCTGTAGTTGGAGTCAACTGTCCATTTGAACGATGATTCGTTTGTTCAAATCTAAAGAGTCGATTCTTTTGAAGTCCCCTTAAATGAATCTTTAATAAGAGCTCATTTGAAATGTTGACACTCTACAAAGTTGAACACTACTATCTAGTATCCATGAAAGTGAGCCTATTGCAGATAGATGTCCTGCTCTCCTGAGGCCTGATTTGAGCCCAGCCTTTATTCTGCTGTTCAGATGAAGATGATGAAGGTGATGAATTACCTGCAGAAGGCGCCGGGTCTGAGAGTCTGAGCTGAAAGATGATGCTGTGCTGGACGGAGCGAACGCCTTGGAGAGTCCGGTCTCTGAAGCACAGAACCTCCA
CAACA/- TCCAGCTGTGAAGCCCTGTGAAGAACACACACATATAAATACAGATACATACATACACACACAGACAGATCCACACACAGAAAAGAAAAGACACAAACACACAGAGAGACAGAAGCACACAAACCTATGCACAAACAGACACACACACACAGAGTTGCTCTTTGAGTGACCTTAAACTTGCAATCACACACAGACAGTGAACTGAAGCCTGAGCGCAGGAGGAGGACTGTGGCATTTCAACACTGAACACAACGCTGAAAATACTGCAGGATTTACGAAATAAACACACTTCAGCAGATCTACAGATGAAGACAAACTATCAGGCCTTTTCAAATATTTGCTTGATGTTTAACAGATTGTGGGCCCTATCATACACCCGGCGCAGTGTGGCGCAAGGCGTGGCGCAGTAGTCTTTTGGTAGTTTCAGCTTGGCGCAAGAGTGGTTTTGAGGCGTTGCACTACGCTGTTTAAATAGCAAATGCATTAGCGCTCATTTGTGC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
atg7hza54/hza54 (AB)Homozygous♀+/- ♂+/-text only from Mawed et al., 2020
atg7hza54/+ (AB)Heterozygous♀+/- ♂+/-2 figures with image from Mawed et al., 20203 figures with image from Mawed et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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