Genomic Feature
hmr8
- ID
- ZDB-ALT-200416-5
- Name
- hmr8
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Longhou Fang Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 3: 1117285 - 1117292 (GRCz11) (1) Details
- Nucleotide change
- CTGTCCA/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 7 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TCCACTCATCACACTTACGCACATAACACACACACACACACACTCTCACCTGTGTCTCTCTCTGTCTCTCAGTGCTGCAGCCGCAGATGCAGAGTATCATGACGTCTCCGCAGGTCCAGCCAATGACCATCCAGCACCAGCGCGTGCTGACGCCGGCCGGACAGACCATACAGACGCTCTCCACAGCGCCCACTACTGTACACACCATGTCCCAGCAAGTGCCTGTACGACACACACACACACACACACACACACACACACACACACAGATCAGCATATGGGTTATTGACATGATGATGATGATGATGATGATGATGATGATGATGTATTTGCAGTCACACATGACAAATGAATATCATCATCATCATCATCCTCATGTATCTCGATATAAGTATTCGTGCGCTGTGATTGGCTGCAGGTGTTGGTGCACCAGCCTCAGATCCTGAAGACGGACTCTCTGCTTCTGACCACCAAACCAGACGGCACACAGGTGCTGTCCA
CTGTCCA/- AGCCCCACGGGCATCACCACGCTGACCACGCCCATCCAGACCACCGCCCTGCAGATGCCGGTGCGTCACTCAATATGCAGATCCCTGCTCATTAATATTCATCACCAATAACAACAACGCTCCCTCCCTCTCTCTCTCACACAGACGCTGATGAGCAGCAACATCCTGACCACCGTTCCCGTGGTGATGGGAGGCGGAGACAAGCTGCCAATCAAACAGCTGTCTTCAGGCCCCGCCCACAATATAGGCGGAGCCCGAGTGGGCGTGGAGCAGAGCCCGGTGGTGGGTCCAGGAGGAGTGGTGAAGGAGGGCGAGAGGAGAACCACGCACAACATCATCGAGAAACGCTACCGCTCCTCCATCAACGACAAGATCCTGGAGCTGCGGGACCTCGTGCTGGGCAACGACGCCAAGGTCAGCGCCGCAATGCATGCTGGGACACATGTGGAGATATAGATATTGATCTACAGTGGAATAAATGACATGTGTCCTATATTAGA - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| srebf2hmr8/hmr8 (AB) | Homozygous | ♀+/- ♂+/- | Fig. 3 from Gu et al., 2019 |
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Supplemental Information
- Genotyping protocol
- None