Genomic Feature
umo15
- ID
- ZDB-ALT-200103-2
- Name
- umo15
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Wei Ge Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 5: 44945723 - 44945729 (GRCz11) (1) Details
- Nucleotide change
- CAGCAGC/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 7 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
CTACAGCCATCACGTGTTTAATTTCGTGTGCGTTGTTTACAAACACAAGTTGTATTTAAGTATTACTATAACACCGCCGTCGAGTTTACAAATAATTTAATTGTTTGCTACAATTGTCTTGATAAATTGTTTATATTCATAGTAAAGTTTGGTCGGTTAGCTACATTGTTGACTGCTTTGGCTAGCTGCAGTTTGGCGCCGTTTTTATCAAGACAGTGACGTTACAAAAACACCATTTATTTTCATGTAAAGTTAACTTATTACAATTTATTTAAACCACGTTTAAATGCCTCGTGCTAATTTTGTTACCTAGAGGGTGAATTTGGGGACTTCATTTGACTTATTTTGTCGTGTTAGGTGGCGTTACGGAGGCAGCAGGCCCAAGAGGAGGAGATGGGCATCTGTAGCCCGATTAACCTTTCCGGTTCAGACACTCTGGTGAAGAACGAGGCCGTGGGTGAAAACGTGTTTACTCTTAGCTCAGGACCGCCATCACCCGC
CAGCAGC/- AGTGCCACCGCCTCTCCAACCAACCTAGGTGAGGAAAACACCTTAGTAATGATTTAATCATAAGAAATATTTATCAGGAACTTTTCGTATTCCCTTGCAAAAATTAAGCATGGTATTACTTAAAAAAACAACAACCTTGTTGTTTGTAGTGAAGCTCAGTTAGGTTAACCTCAAATTAACCACGCGTTTGCTCGTTTCACTGTTTACCCGTGGTTTTTGTATTAAAAGTGTGGTGGTACACATGCTAATCAATATGTAATTAACATGTTAAGTACACGTTTACTATAATTAAACCATTGATTTATTTTATTTTTATGAGGGATTGTTTCAAGGTAATTTTCGAGTTACACAAATGTGAGTTTAGTATTAAATGGTGATTCTTAGTAATTGAGAAGATTAGTTGAAGTATCAAAATTAATGATGTAAATTCATACAAGCAACAATTCTTATAGTGTAAGATACAGCTTTAAAACCACATCAGAGATTACTACAGGGTAGGA - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
dmrt1umo15/umo15 | Homozygous | ♀+/- ♂+/- | Fig 4 ![]() | ||
dmrt1umo15/umo15 (AB) | Homozygous | ♀+/- ♂+/- | 2 figures ![]() | ||
dmrt1umo15/+ (AB) | Heterozygous | ♀+/- ♂+/- | |||
cyp19a1aumo5/+; dmrt1umo15/+ (AB) | Complex | Fig. 1 from Wu et al., 2020 | |||
cyp19a1aumo5/+; dmrt1umo15/+; zf45Tg | Complex | Fig. 1 from Wu et al., 2020 | |||
cyp19a1aumo5/+; dmrt1umo15/umo15 (AB) | Complex | Fig. 1 from Wu et al., 2020 | |||
cyp19a1aumo5/umo5; dmrt1umo15/+ (AB) | Complex | Fig. 1 from Wu et al., 2020 | |||
cyp19a1aumo5/umo5; dmrt1umo15/umo15 (AB) | Complex | 2 figures ![]() | |||
cyp19a1aumo5/umo5; dmrt1umo15/umo15; zf45Tg | Complex | Fig. 1 from Wu et al., 2020 | |||
dmrt1umo15/umo15; gdf9umo18/umo18 | Complex | Fig 4 ![]() |
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Supplemental Information
- Genotyping protocol
- None
- Wu, K., Zhai, Y., Qin, M., Zhao, C., Ai, N., He, J., Ge, W. (2023) Genetic evidence for differential functions of figla and nobox in zebrafish ovarian differentiation and folliculogenesis. Communications biology. 6:11851185
- Chen, W., Zhai, Y., Zhu, B., Wu, K., Fan, Y., Zhou, X., Liu, L., Ge, W. (2022) Loss of growth differentiation factor 9 causes an arrest of early folliculogenesis in zebrafish-A novel insight into its action mechanism. PLoS Genetics. 18:e1010318e1010318
- Wu, K., Song, W., Zhang, Z., Ge, W. (2020) Disruption of dmrt1 rescues the all-male phenotype of cyp19a1a mutant in zebrafish - A Novel insight into the roles of aromatase/estrogens in gonadal differentiation and early folliculogenesis. Development (Cambridge, England). 147(4):
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