Genomic Feature
vbc1
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 18: 50975092 - 50975104 (GRCz11) (1) Details
- Nucleotide change
- CCTCCCTCAGGGT/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 13 bp deleted from position 70 to 83 in RefSeq:NM_001365726.1 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation: Leu>Ser at position 17 (1)
- Flanking Sequence
-
CGGCTAACTAACACACTGAAGAATAATAAATACCATTAATACACAGGAAAACAGATGAAATATACAGAATTATATAGTTTGTAATAATTTTATCATTATTGTGACGCAATCACTGGTTTAAATGCAAGTTATTTTTCTATTTAAGATGTTGGGCTTTAATAGAACTGTTTAATAAACCTGTTTTGTTTAAATTGATCAAATATATTCCCCGCATGCACAGAGAAATGAGAGAAGATGCTGATTATGAAGAGGCGGTGTGCTCAGTTATGCTGGGGAATGTGTGTGAGAGTCATGTTGATGTGGTTTTGGTCAGCTCAGCCTGATGATTGAGCTGATTGTGTTAATGAAGGTAATCAGACAACAGGCCTCAGCTGAAGAGTGTGTGTGTGTGTGTGTGTGTTTATCTCGCAGCTGCTCATCCTCCTCATGTCAGTGTGTGTGTTCTGCTTCAGCATGGGCTGTGTGTTGCTGTTTCTGCTGCTGGTGTGTGTCCCGGTGGT
CCTCCCTCAGGGT/- CTCCGCTGCCTCTTCTGCCCGGTAACGTCGCTGAACAGCTCGTGTGCGCCGGTAGTGACCGAGTGTCCGGTGCAGGAGCTCTGCTACACCGCGGACGGCCGCTTCGGGCGCTCCTCCGTGCTCTTCCGCAAGGGCTGCATGTTGAGGGCAGACTGCAGCCGCTCCAGACACCAGATGATCCGGGGAAACAACATCAGCTTCAGCTTCTCCTGCTGCGGGGGACACTACTGCAACTCCCAGCCGAGAGCGGAGCCCGGGGGCCGGCTACTGCTGCTGCTGCTGCCCGCTGCTGCGCTCACCGCCGCCGGGGCACTCTGACGGAGAAACACACACACACACACACACACACACACACACCAGACAGACGAATAAACACACACCAGACCAAACCGAGACAAACAAACAAACAAACTGTCAGCAGAGTGAACATACTGACACAGCTGCTCCTTCTGGCCGTCATCAAGCGGTCAGAGACAGTGAGCTGGACACGGCACACACTG - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None