Genomic Feature

zou20

ID
ZDB-ALT-181105-3
Name
zou20
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Chandrasekhar Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 11: 23965902 - 23965906 (GRCz11) (1) Details
Nucleotide change
CGGCA/TTAGCCGCGTCA
Variant Notes
mutation sequence details
exon 4, cntn2
wild type....313 GCA ATC AAC CGA  ...
Zygotic as well as maternal-zygotic (MZ) cntn2 homozygous mutants are viable  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
12 bp inserted / 5 bp deleted in Exon 4 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CACAGATCAACTGTGATCCATTAACACCCCTAATTATTATTAATGATTAAAAAAGCTGTGCTGCTTAATTTGTTTATGGAACATGGAATTTTTTTGCTATTTAGTACTTCTGATTTCCAAAGTGATTTCCAAAGTTTTTTATCATACTGTTTTTTTATATATATTATATAATTGAGATCCAGTTTTATATGTAATTTTGACAAAGAAAACTTGAAGATACAATGTATTTGATGAGAGCAGTTTTTAAGTAGATTATTGATATTTCAATAAAATCAATAAAAATATACTATATATATGGCAAATTGGTTATTGACTTTCCTTTACTCTGGTAATAAAGTCAGATCTTGTGTGTGATTTCCTCCCAGGTGGCGTGTGAATGGCACTGACATATCATTTGCTGAAGAGTCGCACTACACACAGGTTGCAGGAAACCTTGTGATCAACAACCCTCAGAATGGGCGAGATGGCGGCTCGTACCAGTGTCTCGCAATCAACCGATG
CGGCA/TTAGCCGCGTCA CCATTGTTAGCCGCGTCGCTAATCTCAAGTTCGGCTGTGAGTAACCATTGTCCAAGTAGAAAACTGGGTCTTGTCTACTACTCGTGCTTGATTTATACTGTGCTTTCTTCCAGACCTGCATGATTTTCCCCCTGAGAGCAGAAGTCCTCAGACGGTCCATGAAGGAATGGGAACATTTCTTGCCTGCCAGCCACCAGCTCATTACCCAGGTAAACACACACACATATCAGTTAGCAAAACATTTCACTCTTTTTTTATTTCGTTAACTCTTGCATCCCTTCTGTTTGTTAGCTTTGTCCTACCGCTGGTTTATCAACGAGTTCCCTAACTTCATCCAGCCAGAAGCGGGCAGGTGGTTTGTTTCTCAGGTCACTGGTAACTTGTATCTTGCTAACGCGAGAGCCAATGACACGGGCAACTATTTCTGCTTCACCACCATCAACATGGATGTCAGCACCAAGAGCATCTTCAGCAAAGCTGTCCAGCTCACAGTTCACCCT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations