Genomic Feature
hza1
- ID
- ZDB-ALT-180410-1
- Name
- hza1
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Jing-Xia Liu Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 16: 6944837 - 6944841 (GRCz11) (1) Details
- Nucleotide change
- CCGCC/-
- Variant Notes
-
deletion of CCGCC
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 5 bp deleted in Exon 1 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
ACGGTAATCGGACGAGTGTCACGCCATCAACTTACTGGGTATGTGCTAAATATATTTACATTTCATGTAAATAAGTTACCAGAGTGTTTTTAATTTATGCAGATATTTAAATAGTATCAGAAAAAGTTCAATAAAATTATAATCTTACATTGTTTACGTGTTTATAAACACTTTTTTTCACTGACCCGGAAGTGAAACGACAAAAACGTTTGTTTCTGTATTTCATTCTTATTTGTTATCCCCCAAGTGCGGTTTATAAAGGAAATGATTTTTTAAGTGATAAAACTTGTATTTTTAAAAGTAAAATAAACCAAACATCTTAGGTGAATGCGTTATTTTTGGTTTCTGTGACCCGGAAGTTTTGAATCTGTCAGGAGTGTTTTACTTTTAGCGTCTTCTCCTTTTGTCTTTGTTTACATGTGGATAAACTGAGGATTTTTTCATTTTGGGTGAAGTTGGTGAATTCAATGTGACGCGCAGTGATGAACGGCAGCTCGAAC
CCGCC/- GCTGGATAAAGAAGAGCATGTGTTGAAGCTCGGGGACAGTTTTGAGAAGAGACCAAAATCATCCTTTCACACCATCAGATGTGAGTCCATCAAGAGAGACATAACATGCGTTATTCAAAGTATATACCAGCTAGAAATTTTCAGTTCTCTACATGCTCTGAGCATATTACCAAGCAATGTTGCAATACTGTTTTCCGCGGGTAGTTTTGTTTTAGTTCCCAGAACATTCTCTTAAAGATAGGAAAACTAGAATAATATTAACCACATTCGCACACCAACAAATCTAATACTTCTTTGCTAAAAGGAAATAGGCCAATAAACCACTTTTTTATAGCAATACGTTTATTAAAAAAAAGTTATATTATCAAATATTCATCTCAAAAAATATTTTTTGTTTTAGTAATGTAATTTATTCAGCCAGGATTTAGTGAACTCACAATATTTAGTAAAAAACATAGAAATTATTTCAGTTCTTATATATATAAAAAGGCCTAAATGTA - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
eaf1hza1/hza1 | Homozygous | ♀+/- ♂+/- | Fig. 1 from Liu et al., 2017 |
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Supplemental Information
- Genotyping protocol
- None
- Liu, W., Lin, S., Li, L., Tai, Z., Liu, J.X. (2023) Zebrafish ELL-associated factors Eaf1/2 modulate erythropoiesis via regulating gata1a expression and WNT signaling to facilitate hypoxia tolerance. Cell regeneration (London, England). 12:1010
- Liu, J.X., Xu, Q.H., Yu, X., Zhang, T., Xie, X., Ouyang, G. (2018) Eaf1 and Eaf2 mediate zebrafish dorsal-ventral axis patterning via suppressing Wnt/β-Catenin activity.. International journal of biological sciences. 14:705-716
- Liu, J.X., Xu, Q.H., Li, S., Yu, X., Liu, W., Ouyang, G., Zhang, T., Chen, L.L. (2017) Transcriptional factors Eaf1/2 inhibit endoderm and mesoderm formation via suppressing TGF-β signaling. Biochimica et biophysica acta. 1860(10):1103-1116
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