Genomic Feature

hg38

ID

ZDB-ALT-170801-8

Name

hg38

Synonyms

None

Affected Genomic Region

trnt1 (1)

Construct

None

Type

Allele with one deletion (1)

Protocol

embryos treated with

CRISPR1-trnt1

Lab of Origin

Sood Lab

Current Source

Other Pages

Alliance

Notes

No data available

Genome Browser

Variants

Variant Type: Small Deletion
Variant Location: Chr 6: 43230602 - 43230611 (GRCz11) (1) Details
Nucleotide change: TCCACCCAGA/-
Variant Notes: 10 bp deletion in exon 6, cDNA: 704delTCTGGGTGGA, p. I235SfsX21
Zebrafish Nomenclature Committee

Effect on DNA/cDNA, transcript, protein (from publications)

DNA/cDNA Change: 10 bp deleted in Exon 6 (1)
Transcript Consequence: None
Protein Consequence: None

Sequences

Flanking Sequence: TTAAAGAGCTACATTACAATTGTTTACCCTCAAAAGTACAAATAAAGAGACTTCTATGATAATTCAGACATCAAAAGCATGCACATCACAGTCACTAGCTGTGTTTCCATCCAAAAATGTCAATTAACCTTTTGCGAAAAACTGGATTATCGCATAAAAGACGTGCAAATAAAGCAGTGTTTCTATTCAAGGAGTCAAAGCAAACAAAATCGTCACTTCCTTATTATTTATGTGCATTGTGGTGTTTCCATCAACTGATTTTTTATGCGCATCTCCAAAATGTGAATAAAATAGGTGGATGGAAACATAGCTACTGTCAGTATGAATTGCAATTTAATTAAAAAGCTTAAAAATCAAAATGAAAAAAATGAGCTGTAAGATGTTTCTCTACATATTTTCAATCACAATGTTTTTCCTCACCTGTGTACTGGGCTAAACCCAACTCATAGACGAGTTCCAGCAGGTGACCAGCATGATTTCCAACCAGCATCTTCTTCAAC
TCCACCCAGA/- TCCTCTCGCCTGAGATTCCAGCCAATCCTCTAGCGTTTTCTCTTATTGCCTCCAAAGTCTCTGGTTCATGTTGGCCAGGTTCAGCTGCCACTCGTCCATAGAATCTACAGAGCAACCAAACCTCATAATTACTTTACCCTCGTACTGTTTCAAACATGCATGTGGATCAAAGACGAGAAGTTCCTTGTTGTTAAATTAATAGTAGTGATGGTGAAATGAAGCTTTCTGAACCAGTGAAGCACTCGACTCAATTGTATCGGAAAAAGGTTCGTTATTCGAAGCTTTCTAAATCAGAGCTCGATGAGGACCTCTTCTGGTGAAAGTGTGGGAAAGCACTGTGTTGCCATAATGTCAAATTTTCACAACTGACCAACTCATTCATGTAGTAATACAACAACAGCAATATAAACAAATTACTTAATTACTGTAGTTTTTACACAAGATATATTACATTACACAACTGATGATTGTAGTAAAATCCAAGGTATTCAAAAGTTTAT
Additional Sequence: None

Fish

Supplemental Information

Genotyping protocol: None

Citations