Genomic Feature

oz32

ID
ZDB-ALT-170523-3
Name
oz32
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Amacher Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 22: 20864286 (GRCz11) (1) Details
Nucleotide change
C/-
Variant Notes
truncation in Pax domain
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
ATACTGCTTATTTTCTAAATCTAATATGAAAAACACTATTATTTATTTATTTATTTTCCAAAAGTATGTTATTTTATTTCACGTTTTTACAAGAAGAAAAGTCACTGTTTGTTTAGGGTAATCGGTGTCTAAATTCCAGCTTTTCAACATTGTTCAATAAATAATTATAGATTGTAGTGTGCGTTTCCTTCAATTATTTTAAAATCAAGTTATGCACCCTTCATTTAAAAACTCTCACTTGTAATATGTGAGCATAATGACTTGTCAGTGAACTAAAAAAAAAAACAATAATAATAATTAAGTTTATTAATTGTAATCGAATTAATCAAGATTTTGATTTTAGGTCAAATCACCCAGCCCTAATATAATATATTAATTGGTGAGAGACAAAATGGTTCTAACTTTAAACATTTAGCAGATACTTTTTTCCAAAGCAACTTATAATTGAGGAGGCATTCAGCAATTCAACAAGGAGGCAACACTAACAAGAAGTGCTAATG
C/- AACAGGCACAGTTAGTGCTCAGAGAATTTGGTGCTAAAGTAACGGGAAGTGCTTTTTTATTTTAAAGAGGGATTAGTGTTTCCACAGGTGGTTTGTCAAGATGATCAGGTAAAGTGTTGTACGTACGCACGCACGCACGCACACACACAATTAGCAAATAAATGAAAAAGGAGTGAAATAAAAAAGGGAAGCACTTAAAATAATCAAGTAAAATACACTAGTTGAAGCATTAAGAAAAATGAATGAAAACAGTAGTAATAGGATTGGGTGATGTAGACCAAATTGTCATCTTACGATGTCTAATGTGAAACATTGCTATGGACAATGACATCGTCGTATTTTGCAGTGAATTAATTATTTATGAATTATTAATTAATCCATTACAAATTAATTATTTGTAGCCTACTGTTTTAATTAGCTGACCTGAATGGTCTTTGCTTTACCCATAACCAAATCATAAATAAATAAATAAATATAAATTACACAAAAATTACCACCAG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations