Genomic Feature

ncv105

ID
ZDB-ALT-170314-8
Name
ncv105
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Mochizuki Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 15
Variants
Variant Type
Small Deletion
Variant Location
Chr 15: 36241537 - 36241541 (GRCz11) (1) Details
Nucleotide change
CAGTG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted (1)
Transcript Consequence
None
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CTCAAACTCTGTGTTGACATTATCAAATTTCACTTGAAGACTTTTGACCCCGATAGCATTCCATATTACTGAGCACTGAACTTTACCACCTTTGAAGCCAACTGTAGACCATTTCAGATGCAAAACTGAATTTGTTTCCTTCAATTACATATGGATAATGACAAGACAGGCAGACAGGGTGATCCAGCGGGTCAGTTCTCAGACGGGCTAACAGGTAGCTCATATTCATAACAGTATACTAACCTCCTGCAGAGGCTCTCTAGGGGAAACCCCACCGTATTTATAGAGCAGTGGGACTGATGACAGTTTATCATCTGTCACTTCGTTCAGTTAATCCAAAAACATACGTGAAATGTGTTTGTGATTTTAAAGACAGGCCGAGTGTAAATGAACACATAATCTAACCTTATTCTCTCTCTCATACAGTACATATTTATATCAGAGCGAGACCTGAACTTACCTCTGGTCTTCCTTGCGGTATGTGAAGGCTTTCGGCACTG
CAGTG/- GAACAAGGTCAGTGTCAGCAGACAAGAGAGCAGCACACATCCACAGCCCAGCATCTGCATTACATTAACAAAGCCATTTTGACAATCAGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATACATACAGTACATGTATTTGTATGTATGTGTGTCTTGTTGCCTATCCAATTAGAAACCTATTAGAAACAGCAAATAATAACTTGACCTCTAGTTGATCATTTGGTATCAGAAGTGGCTTATATGAAAGGCAAAGCCCTCTAGATTTGACTTATTTTACCGAAATAAAATATGATTACGCCTTAATTTTTAATTATTTAATTAAGACAGTAAGGTTGACTTTGCTTAGACAAAAGTCTTGTCACTTAACAGAAATAATGTACAGTGTAGAATTTTGTATGACTCCCATGAGCTTGGAGGACTGCATCCATACATCTC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
ostnncv105/ncv105Homozygous♀+/- ♂+/-2 figures with image from Chiba et al., 2017
ostnncv105/ncv105; ncv38Tg/ncv38TgComplex2 figures with image from Chiba et al., 2017
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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