Genomic Feature
ca23
- ID
- ZDB-ALT-160809-2
- Name
- ca23
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Childs Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 20: 26690568 - 26690586 (GRCz11) (1) Details
- Nucleotide change
- ACTCAGGTCTGCGACGCCC/GGTCA
- Variant Notes
-
premature stop in the conserved FOX DNA binding domain
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 19 bp inserted / 5 bp deleted in Exon 1 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
ACGAACTCAGTCTTTCCATTTCGTTCTCAAAAAGGGATTACAGCCGCCAGGATTAGCACGAAACTGTGAAACTGAAAACGGTGATAACGACCACGAATACGCATGTTGCTTGGATATTTTTTCGCACAAACAGCAGGCTTTTTATTTGCCACACCACTCCACGCCGTACAGAAGACGGTCACATTTATGTCGGATGCGTGATGCTTGTATTATTACAGGTTTTCAGCTGAAGCGAGGCGTTTATCCTCAGTTGTTTTTTCTTAAAAGTCGTTATTGGTTGTCGATCGATCCTCTAGGGTTTGCTTTACCTTTTTCTTCAGACAACGGGCTGTTTTCGTACGTCACAGCTGGACCGATGACGACTGAAAGCTCTCACGGACCCCTGGGGTCGACGCCCCCGACAAGGACCAGTCCAGCGACCACCGCGCTGCATCCAGGACTGATGAACTCGACAGGTAACTTGGAGGAGCATAGCGCAGTGTCAAAGAGTAAAAAGACCA
ACTCAGGTCTGCGACGCCC/GGTCA GGAGAAACCGCCCTACTCCTACATTGCTCTCATTGTGATGGCAATTCAGAGCGCACCAACCAAAAGACTGACACTTAGTGAGATTTACCAGTTTTTACAAACACGCTTCCCGTTTTTCCGAGGCTCTTATCAGGGCTGGAAGAACTCTGTTCGGCACAACTTGTCTCTGAACGAGTGCTTTATAAAACTACCAAAAGGTCTTGGGCGACCGGGTAAAGGACACTACTGGACCATAGACCCAACAAGCGAATTTATGTTCGAGGAAGGGTCATTTCGGCGAAGACCCCGAGGATTTAGGAGAAAATGTCAGGCTATGAAACCAATGTACAGAATGATGAACGGCCTAGGGTTCGGTTCCGCCATTTTACCTCAGAGCTTCGACTATCAATCGCCTACCGGTGCACTTGCGTGCCATAGCAGTGGCTATAACTTGGACCTGTCCGGCAGTGGATATGAATCAATAAGCAGTGGTCACCACGGCCACATGTCCCCAAGCTCTA - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None