Genomic Feature
ya1847
- ID
- ZDB-ALT-160707-6
- Name
- ya1847
- Synonyms
-
- cntnap2aD121 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with zinc finger nuclease
- Lab of Origin
- Giraldez Lab
- Current Source
- Zebrafish International Resource Center (ZIRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 24: 17871741 - 17871861 (GRCz11) (1) Details
- Nucleotide change
- CTTGATGGTATGGTTTCCAGTTTCTTCCTGTGTCACTATAGAGCAGCCGGTATCGTGTTGTCCAATCAGAACTGCTATATCGACCCTGTGTGGCGACGGCTGTGACCTGTTTTCTGCTTCC/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 121 bp deleted in Exon 3 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- None
- Flanking Sequence
-
AATTCTGGTAGTTCCATAGTTAAAATGATTTGGTTTCAATGGTCAATATAAAGACAGGTTGAGTTTAGAATTTAGTTTGAGGTACTATTATTTGGGTGGCACGGTCTTTTTAGTTTATAAAAAAGAAACCTAATGCATCCACACCATCACTGTCAATATAATTCACAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATTTTATTTATTTGTTTATTTTTAAATTCCAATTTCTAATTTATTTATATTATTTAACTTCAAAAAAGTTTTTACCTTGCTTGTGCAGAAAAGGGGCTAAATTAAAAATAACAAAGATGGAAACTCATTTGCTGAATAAACTCCTACATAGAACATTACATCCATGTACAAGTGAACAAACATTCATATCCTAATCATAACTTTTTGCATGCACTATATTAATACTCACCCAGATGTTGCCAT
CTTGATGGTATGGTTTCCAGTTTCTTCCTGTGTCACTATAGAGCAGCCGGTATCGTGTTGTCCAATCAGAACTGCTATATCGACCCTGTGTGGCGACGGCTGTGACCTGTTTTCTGCTTCC/- CAGGTCGACCTGCAGCCACTGGTAATGATCACTGTCCAGCGGAGACCAGCCCCCAGCACCTACAGAAACAGCACCATACTCAGTATCTTGTTGTATTGATCTAAAATCTTTGTGGTCTTGTCACACAGGGGTTAGAGAAGAACACAGCAGGAGTAGCTGTCTGTTCACAGTAAATATTACGTGTTCTTTTATCAATTTTAAGGGTATTCATTTAAAGGGTCATGTACTACAGGATAACCTGCAGAAGATGTACAATTTACAGGGATCTGCTGATGTTTGGTAAACTGAATGTTCAAGAGGAACATCTGTGTTATTACTGTATGTTCTCGCTTCTCCAGAAAAGTCTTGGGAACAGATTGTCTTACAGATGTTTTATCTGTGCTTTTAGCCAGAGGCTTTTGGACATTTGTTAAAGTGATTTTTGAAGGATCATTAAATGTTGTAAATAGAACCATTAATATGAAAAAAAATGTTCCGAACACATGGCTCCCATTCTACAT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None