Genomic Feature

tft001

ID
ZDB-ALT-150219-2
Name
tft001
Synonyms
  • fan (1)
  • fantome (1)
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
ENU 
Lab of Origin
Yelick Laboratory
Current Source
Other Pages
Notes
Comment Citation
The fantome (fan) mutant allele has a cytosine to thymidine mutation at  ... Zhao et al., 2014
Genome Browser
Genome Build: GRCz11Chromosome: 17
Variants
Variant Type
Point Mutation
Variant Location
Chr 17: 24829132 (GRCz11) (1) Details
Nucleotide change
C/T
Variant Notes
The fantome (fan) mutant allele has a cytosine to thymidine mutation at  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
C>T in Exon 9 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation: Arg>Stop at position 356 (1)
Sequences
Flanking Sequence
CTGAGTTTACAGTCATGTGCATATTATTTTTAACACCCCTCTGTGTGTTTTTCAGGCTGTGCGGTTAGCAGTGGTTTGTAAGGATGGGCAGCTTCATCTTTTTGAGCACTTTTTGAATGGGTCAGTTTGTCTTTCTCTTCATAAATATCAGTGTAAATATTTTAAATCTTTAAAACTAGATTGTGCTGAAGCTGATGTTGGTATTTGTCTCCCACAGGCAGTGTAAGAAGCCACTGTCTCCAGCGTGTTCCCTTCAGGTGTCCACTATGAAGGGAGAGTCTCCAGTGCCTGTGCCTCTACTGGCAGCTGCTCTGTGTGCGGACAGACAGAACCTGATGCTGGCATATGGACATCACCTGCAGCCCGTCATGGAGAAAACAGTGAGTACAGCAGAGACTCCTGTTTGATTATAAGAAGTTATTTAATTGGTTAGTTGTACTATCATGCCATGTTTCTTTCCCCAGCCTTTTAACACATCAGAGAGGCACACATGCTTGAAC
C/T GAGATGTACATGCCACACTTTCTCTTTCTGTAGACACGACTGTCTCCAAGGTAAGACTTGCATGTGTGCTGTTAATGTATATTTTATATTTTTAAATGATTAAATATTGATTGTATCATCATCATTATTGACTCGGCATACTTTTTAAAAACAATCAAAATTACAGCTTTTTTTGTTCTGGATACTTATTATACATGTTTTTTTACAAGTTGCATGACTACACTGATATTTTACTTTCATCATATTTATTGGTCAAACTGCAGTACAATGTATGTGAACTACACATGTAATAGATGAAATGTTTAAAGAAATGTTTAATCACTTACAACTTAAATATACACTATATAAAAAAAAGCAAGTCTTAGGCTCTGTTTGGCATCTTTATTATATTCTAAAAAAATGTACTTGATTTACTTGTGAAATCTCTTTTTTTGAATTAAAAGAAAGTTAAAAGTGATTTTCTTTAGATTTTCTTATTCTATATCAATGAATATATTACT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
wdr43tft001/tft001Homozygous♀+/- ♂+/-4 figures with image from Zhao et al., 20143 figures with image from Zhao et al., 2014
wdr43tft001/tft001; y1TgComplexFig. 1 with image from Zhao et al., 2014Fig. 1 with image from Zhao et al., 2014
wdr43tft001/tft001 + MO5-tp53ComplexFig. 9 with image from Zhao et al., 2014
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Supplemental Information
Genotyping protocol
None
Citations