Genomic Feature

y277

ID
ZDB-ALT-141015-2
Name
y277
Synonyms
  • pak4D4 (1)
  • PAK4 delta4 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Sargent Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 15: 25468104 - 25468107 (GRCz11) (1) Details
Nucleotide change
GCAT/-
Variant Notes
Law and Sargent (2014): TALEN were designed targeting exon 2 of the zebrafish  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
None
Sequences
Flanking Sequence
TCATAATGAGTCTATCAAGAAATAATAATAAGTCTATCAATAATAATGAAAACTGATGCGTCATCACTCGACTTTAATCCTATCCCAAAAGTTATTTTAATTCTGGAAGATGAATTAAATTTAAAGAGAATTTAAAATTATCCAGTTTTCCCCACAATTAAAGCTAACAGGTGCTAACATTATCTTAACTGATGCTCAACACACCAAATCTGTTAAAATCTTAAAAGTACTTGAGGAATTCTTAAGTCTTAAATATAAACATAGATCTTTTGCAACATTATAAATGCATTTACTAAAACAAAATGATTCGTTCTTGCTATTATGGTATTTAATTATTTTTACATTTCTTTAATGACCCTGCTCCTTGGGGCAGTAAAGTATGTTTCTTAGAACTTTCATTGAGTTATAATTGTTTTGTCGATAAAGAATTGTTTTTTTCTTTTCTTGCTTCTAGGTCTGATGCCCTGCTGCAGCCATGTTCAGCAAGAAGAAAAAGCAAC
GCAT/- CCAGATCTCAGCACCTTCGAACTTTGAGCATCGTGTCCACACTGATTTTGATGAACAGGAGCAGAAGTTTGTTGGCCTTCCACGCCAATGGCAGAGCCTCATTGAAGACACGGCCAAGAGGCCCAAACCCTTCATCGATGCCACAGTCATCACTACTGTTGAGCCACGCAAGGTCAGAGCAGATGGTTGGAACTGCTGGATATTTTATTATTTTCTCTCCATAAATACCTCGTAACGTGTTTGTGTTTCACAGACAATTGTCCGAGGTCGTAAGATCGGTGACGATGGCTCCCTCACCTGGCTCCTGGATGAGTTTGAAACCATGTCGGTGATCCGCTCCAACTCCCTGCGGAGAGGCAGTCCACCTTTACAACCACGCAGTGACTCTGGATCATCAGGAGGCCATGAGAACGGCGAACACCCCCAATATAGACACACTGATCGCTATGGGGACAGCAAAGAGAGGTGCTAAACTGATTTCCCTTACTCTGATCTACATG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations