Genomic Feature

y276

ID
ZDB-ALT-141015-1
Name
y276
Synonyms
  • pak4D2 (1)
  • PAK4 delta2 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Sargent Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 15: 25468104 - 25468105 (GRCz11) (1) Details
Nucleotide change
GC/-
Variant Notes
Law and Sargent (2014): TALEN were designed targeting exon 2 of the zebrafish  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp deleted (1)
Transcript Consequence
Frameshift (1)
Protein Consequence
None
Sequences
Flanking Sequence
TCATAATGAGTCTATCAAGAAATAATAATAAGTCTATCAATAATAATGAAAACTGATGCGTCATCACTCGACTTTAATCCTATCCCAAAAGTTATTTTAATTCTGGAAGATGAATTAAATTTAAAGAGAATTTAAAATTATCCAGTTTTCCCCACAATTAAAGCTAACAGGTGCTAACATTATCTTAACTGATGCTCAACACACCAAATCTGTTAAAATCTTAAAAGTACTTGAGGAATTCTTAAGTCTTAAATATAAACATAGATCTTTTGCAACATTATAAATGCATTTACTAAAACAAAATGATTCGTTCTTGCTATTATGGTATTTAATTATTTTTACATTTCTTTAATGACCCTGCTCCTTGGGGCAGTAAAGTATGTTTCTTAGAACTTTCATTGAGTTATAATTGTTTTGTCGATAAAGAATTGTTTTTTTCTTTTCTTGCTTCTAGGTCTGATGCCCTGCTGCAGCCATGTTCAGCAAGAAGAAAAAGCAAC
GC/- ATCCAGATCTCAGCACCTTCGAACTTTGAGCATCGTGTCCACACTGATTTTGATGAACAGGAGCAGAAGTTTGTTGGCCTTCCACGCCAATGGCAGAGCCTCATTGAAGACACGGCCAAGAGGCCCAAACCCTTCATCGATGCCACAGTCATCACTACTGTTGAGCCACGCAAGGTCAGAGCAGATGGTTGGAACTGCTGGATATTTTATTATTTTCTCTCCATAAATACCTCGTAACGTGTTTGTGTTTCACAGACAATTGTCCGAGGTCGTAAGATCGGTGACGATGGCTCCCTCACCTGGCTCCTGGATGAGTTTGAAACCATGTCGGTGATCCGCTCCAACTCCCTGCGGAGAGGCAGTCCACCTTTACAACCACGCAGTGACTCTGGATCATCAGGAGGCCATGAGAACGGCGAACACCCCCAATATAGACACACTGATCGCTATGGGGACAGCAAAGAGAGGTGCTAAACTGATTTCCCTTACTCTGATCTACA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations