Genomic Feature

pd1050

ID
ZDB-ALT-121210-3
Name
pd1050
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Bagnat Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 18: 20685233 - 20685244 (GRCz11) (1) Details
Nucleotide change
CACCACTGCAAT/AAATATGGATATGGATATA
Variant Notes
The cftr pd1050 mutation is a TALEN-produced indel producing a stop codon at  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
19 bp inserted / 12 bp deleted (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
CTCTAATAATATTGAAGCGCAACAGAAAGGGTATTGAATCTTGATCTCCAAAAGTTTTCTAATTTAGGGCAAATCTAGAATGTGTGCATTAAAGTACCCCCAGCTGCCTGGCATCTATTACACAAAGAGCTAACACCAGGTTTATGGATGGAGTGTATTTAAATGAATCATGCAATGTGATTTATTTGCAATAGGCTTGTGTTAGCCAGCAGGCTGTCTGTGCAGATAATAAAATACACTAACCTTATTATAATCAGATTTGCTTGTTTCTGACTTGATTTGACATTATAAAAATAAGCTTCTGCATCTGTATTCTTAAATTTGTTCATTCATAGTAGATCACTTGCAGAACTTTCTGCTCCTTTTGGAGCTTTTATGCCCTATTAGTAAATTTGGGCCTAAATTTCAAATGATTTGCTTTTTAAAAGTGCTTAATGTCTCATACATTTCTTTTGTTTTTTTCCTACAGAGCCTGGGTATGGCCCATTTTATATGGATAT
CACCACTGCAAT/AAATATGGATATGGATATA GCATCCTGTGTACAGGGCTTATCTGGGAACTCATTGATGTCAATAGCTTCTGTGCACTTGCCGCCATCTCTTTACTGGGTGTTTTGCAGGCCTTCCTTTCACATAAAATGGGTCCTTACAAGTAAGTCTCATATTAGCCTACTGTGCATCCAAATACCAAAAAGTTAATCGTGTCTTACTCTAATAAACTTTGGCAGAGATTTTGCAGAAGTATTTTTATGCTCCCACAGAAACACGCGCATTCCAATTGTGATTCATCCCAAAAGCTTTGAAGAGTTTGGACAGGTAGTTCAGTGCTGCTCCTGTAATCAGGAGGCTGGATAGCCTTGTGCCTTTGAGAAATGTAAACAATGTTGGTCAGAACCGCCACCGAGACAGATTATCACAAGTGTAATTCCGAGTGGGCATTTAGTGTCTGTATTCAGTGTCAGTATAGGCATCATGCTTAGTCAGATGTATTAAACACCCACGTTGGAGTGTTTATGTCATACAGGACGTGA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations