Genomic Feature

b1110

ID
ZDB-ALT-120221-11
Name
b1110
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
embryos treated with ENU
Lab of Origin
Kimmel Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 5
Variants
Variant Type
Point Mutation
Variant Location
Chr 5: 30850187 (GRCz11) (1) Details
Nucleotide change
T/A
Variant Notes
A to T change at nucleotide 427 resulting in a premature stop codon after  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
A>T at position 427 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
at position 143 (1)
Sequences
Flanking Sequence
TGTGAATAAAGGAAAGATTAAACAGAGTAAAAGATATAGAAGAGAGAAGACAAACATCGGTCTCGTTTATAGCAAGAGGTCTTCAGAGACAATCCTAGTGTTATGCTAAGTGAGCATGTCATTTAATCATTTCATCTTAGCAAACGGGAAAAGGAAAAAGCAAAGGGTGAGAGAGAGTGCAAGAGTGAGAGACATCTAAATGATGAAGTAGACTGACTTTTCTTTATGCTGTTATGTTGAATGACTAGAGTGTCGTTTCAAAGCGCTCTCAAATGAGCCAGAAACTGAATGAGCTCTAGAGATGCTTCTAAAAATACCCAAACGAGCACTGCAGGAACCAATGCAAACCTTTCTGGGTACAAACAAGCTACATTTATATTTTAAAAGCTTCTCCTAAAAAGATTGTCAGGATGACATGATGTCTTTAAGCGGTTGAGAGGACACATTGAAAAGTTTAGGATGATGCTTGTAGAGGAGGGAATATGTGATGCTTACTTCTT
T/A GGTAATGAAAGAGCTTAGCAGCGTCACAGCGGACCAGAAAAAGATTCCACAGCTCAGGATGATCTTTCTGTTGAAGCGATCCCCCAGGTAACCAAAAATGGGGGCGGCCACCATGAAACTGCAGATGAAGACTGGAAAAAAGAAAACAGAAGCGGACATGTTTAACTTTCTTTCTTTATTTGTTTCCTGATACATTGAAGTCATTGTAAAAATAACAATTTCAGTTCTTTTTTGGAAAAACTAAAATCCCACTTGTGCAGATGGAAACTAAAAAAGTTGATACAAATTCTGTCGATGTCTGCTTGTGAATCCTTATTCTTCTAAATGACGAGGAAGCTTTACAATTCCCTGTTTTGGTTTCCCTAATTTACTTTCTACCCATGATTCCCTTATGTGTTAAGACTGATAACTTAAATAAACATAAACATGCAAAAATATTCTTCATTTAAGATTGCTTTTGCCAAGCAGTGTGCCGTGACTGTAGATTTGCAGTTATAAAA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
spns2b1110/b1110Homozygous♀+/- ♂+/-3 figures with image from Balczerski et al., 20123 figures with image from Balczerski et al., 2012
spns2b1110/b1110; el2TgComplexFig. 1 with image from Balczerski et al., 2012Fig. 1 with image from Balczerski et al., 2012
1 - 2 of 2
Show
Supplemental Information
Genotyping protocol
None
Citations